Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq82 176 5e-39 seq70 161 1e-34 seq74 147 2e-30 seq48 127 2e-24 seq85 125 7e-24 >seq82 Length=918051 Score = 176 bits (194), Expect = 5e-39 Identities = 173/223 (78%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 |||||| || ||||| |||||||| |||||| | ||| || || | ||| ||||| Sbjct 77857 GATTTGGAAACCGTAGAAGCACCGAGCCTCGGCGGACTGGACCTCACCGGAGAATCGCTC 77916 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||| || || ||||||||||||||| |||||||||||||| || |||||| ||| Sbjct 77917 GACCAAGTTCTCATTGACGATGCCGTCGGACGCGGCGAAAAAGGCGAGGACGTGCGAGAT 77976 Query 133338 GAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | |||||||| | || | | ||||||||| || |||||||||||| ||| Sbjct 77977 GAAGTAGCGCTCGTCGGGCTTGAGTTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 78036 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 || ||| ||| ||||||||||||| |||||||| || |||||| Sbjct 78037 CATCTCTTCGGCGGTCCAAAACGATGCCTCGGCCTTCTTGTAC 78079 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||||| | ||||||||||||| || | ||||||||| | || ||||| |||||| Sbjct 77246 GAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 77305 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGG 132991 ||| ||||| |||||||| | ||| || || |||||||| || |||| Sbjct 77306 GAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGG 77352 >seq70 Length=1260279 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || |||||||| ||||| || ||||| |||| |||||| | | Sbjct 438406 ATGCAAATCTTTGTCAAGACGCTCACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCA 438347 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||| ||||| |||||| | ||||| Sbjct 438346 GACA-CGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCA 438288 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | |||||||| ||| |||| |||| ||||| ||| ||||||||| Sbjct 438287 ACAGCGTCTCATCTTTGCGGGCAAGCAGTTGGAGGACGGTCGCACGCTCTCCGACTACAA 438228 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || ||||| |||||||||| |||||||| ||| | ||||||| Sbjct 438227 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGG 438180 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || ||||| |||| |||||| || | Sbjct 679849 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 679790 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| ||||||| Sbjct 679789 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 679730 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || ||||| || |||| ||||| ||| |||||||||| Sbjct 679729 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 679670 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| |||||||||| |||||||||||| | ||||||| Sbjct 679669 ATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCGTCTCCGAGGCGG 679623 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || ||||| |||| |||||| || | Sbjct 680077 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCA 680018 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| |||||| ||||||| Sbjct 680017 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 679958 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || ||||| || |||| ||||| ||| |||||||||| Sbjct 679957 CAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAAC 679898 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || |||||| |||||||||| |||||||| ||| | ||||||| Sbjct 679897 ATTCAGAAGGAATCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGG 679851 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || ||||| || ||||| |||| |||||| || | Sbjct 680305 ATGCAAATTTTCGTCAAGACTTTGACAGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 680246 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| |||||| ||||||| Sbjct 680245 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 680187 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| || || ||||| || |||| ||||| ||| ||||||||| Sbjct 680186 GCAGCGATTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTCTCCGACTACAA 680127 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| |||||||||| |||||||| ||| | ||||||| Sbjct 680126 CATTCAGAAGGAATCGACGCTGCACTTGGTGCTCCGTCTCCGAGGCGG 680079 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||||||||| ||||| || |||||| |||| |||||| | | Sbjct 438634 ATGCAAATCTTCGTTAAAACGCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCATCA 438575 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||| ||||| |||||| | ||||| Sbjct 438574 GACA-CGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCA 438516 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || |||| ||||| ||| || ||||| Sbjct 438515 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCGGATTACAA 438456 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||||||||| |||||||| ||| Sbjct 438455 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTTCGT 438419 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || || || |||| |||||| | | Sbjct 438178 ATGCAAATTTTCGTCAAGACGCTGACCGGCAAGACGATTACGCTCGAGGTCGAGTCGTCA 438119 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||| ||||| |||||| | ||||| Sbjct 438118 GACA-CGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCA 438060 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| ||||| ||||| || |||| ||||| ||| ||| ||||| Sbjct 438059 ACAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACGCTCTCCGATTACAA 438000 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| ||||||| ||||||||||| ||| Sbjct 437999 CATTCAGAAGGAGTCGACGCTTCATTTGGTGCTCCGT 437963 >seq74 Length=1285146 Score = 147 bits (162), Expect = 2e-30 Identities = 163/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 ||||||| ||||| || || ||||||||||| ||||||||| |||| |||||| | ||| Sbjct 284502 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 284561 Query 38305 ACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| || | | | | |||| || |||| ||||| || || || ||| ||||||| Sbjct 284562 ACA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCCGACCAG 284620 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 284621 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAAC 284680 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| |||| || || |||||||| || Sbjct 284681 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCG 284715 >seq48 Length=317269 Score = 127 bits (140), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTC--TTGAGCGAAACGC 133275 ||| ||||| || |||||||||| ||||||| | |||||| || ||||| || | | Sbjct 262868 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGGACTGCACCTCGCTTGAG--AACCTC 262925 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 ||||||||||| || || || | || || |||||||||||||| |||||||| | Sbjct 262926 TCGACCAGATTCTCATTCACAACCCCATCCGAAGCGGCGAAAAAGGCGAGCACGTGGGCG 262985 Query 133336 ATGAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 || || | ||| |||| || ||| | | | | ||||||| | ||| ||| ||| Sbjct 262986 ATAAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGG 263045 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||| ||| ||| |||||| ||||| | ||||| ||||||||| Sbjct 263046 TCGATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACAT 263092 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| |||||| | | || || ||| ||| | || ||||| | ||| ||||| Sbjct 262287 CAAATGACTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGATATGAG 262346 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 |||||| ||||| | ||| ||||||||||| |||||||||||||||||||||| ||| Sbjct 262347 CTCGTTGGAGAAAGAGAGGCCAGGCATGAGGCCTCGTTTTTTGAGCCAAAATATGGAGGC 262406 Query 132996 GAA 132998 ||| Sbjct 262407 GAA 262409 >seq85 Length=620530 Score = 125 bits (138), Expect = 7e-24 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 |||||| ||||| || || || |||||||| || |||||| |||| |||||| | |||| Sbjct 150976 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 151035 Query 38306 CAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363 || || | | | | |||| || |||| ||||| || || || |||||| ||||| Sbjct 151036 CA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 151093 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 151094 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAAC 151153 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| |||| || || ||||| || || Sbjct 151154 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCG 151188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171980967040