Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq79 181 1e-40
seq76 152 6e-32
seq74 134 2e-26
seq82 98.7 1e-15
>seq79
Length=1733205
Score = 181 bits (200), Expect = 1e-40
Identities = 534/809 (66%), Gaps = 23/809 (3%)
Strand=Plus/Plus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||| ||| ||||| ||||||| ||||| |||| ||||| || | || || || ||
Sbjct 50368 CCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 50427
Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729
||| || | ||| || |||||| | | || |||| |||||| | || || ||||
Sbjct 50428 CTTGCAGTCGTACAACTTCATGTCCGAGCGCTAC-TTCACCCACGCCTCGCCGACGCTCT 50486
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||||||| || || || || || | || |||||||| | | | ||||| |
Sbjct 50487 TCAACGCCGGAACGCCTCACCCGCAGCTCTCGTCCTGTTTCCTGGTCACGATGAAGGACG 50546
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
|||| || | ||||| |||| ||| |||| || || | ||||| ||| || |
Sbjct 50547 ATTCGATTGAAGGCATCTACGACACACTCAAGACGTGCGCGCTCATCTCCAAGACCGCCG 50606
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTAC 111907
|||||||||| || |||||| | || | || | | | ||| || | | || ||
Sbjct 50607 GTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACC--GGCTCCTACATCGCCGGCAC 50664
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
||||| | || | || || | || ||||| || || | ||| ||| ||||||||
Sbjct 50665 GAATGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTA 50724
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
|| |||||| ||| ||||| | ||| | |||| |||| || ||||| ||
Sbjct 50725 CGTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTG 50781
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079
|||||| || || | |||||||| || | || ||||| || | ||||| | ||
Sbjct 50782 GCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCG 50841
Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139
|| | || |||||||||| |||||||||||||| |||||||||||| || | || |||
Sbjct 50842 CGCT--CGTGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAG 50899
Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199
| ||| | ||| | ||||| || || | | | || ||||| ||| ||| | |
Sbjct 50900 GCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTAC 50959
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259
|| || |||||| | | | | | || ||||| | || | || || | ||||
Sbjct 50960 GGCGAAGAGTTTCGCGTCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACG 51019
Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318
| || || || | | | ||| | || |||||| | | || ||| || || | ||
Sbjct 51020 ATCCCCGC-GCAAAAGCTTTGGTATGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCC 51078
Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGA-GTAATCAAAAGAATTTGGGTGTGA 112377
| ||||| ||||| |||| ||| || ||||| | || |||||||| | || ||
Sbjct 51079 GTTCATGCTCTACAAGGACG-CTGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGA 51137
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATC 112406
||||| || ||||| || || ||||||
Sbjct 51138 TCAAGTCGTCGAACCTTTGCACTGAAATC 51166
>seq76
Length=1206387
Score = 152 bits (168), Expect = 6e-32
Identities = 276/396 (70%), Gaps = 6/396 (2%)
Strand=Plus/Plus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| |||||||| | || ||| ||| ||| ||||| |||| | || |||
Sbjct 68854 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATC 68913
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATT 13710
|||| ||| ||||||||||| || ||| ||||||||| | ||| | | ||| |
Sbjct 68914 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGG-TTTCT 68972
Query 13711 GGCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCA 13770
|| |||| ||||| ||||||||||| |||| ||| |||||| ||| ||| | ||||
Sbjct 68973 GGATCGTCAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCA 69032
Query 13771 ACCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTAT 13828
|||| || || ||| | || ||| ||| ||| || || | |||||| | ||| | | |
Sbjct 69033 ACCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATCTCGCGA-GCTGT 69090
Query 13829 CAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 13888
| | ||| | ||| || |||| | | | | | || ||||| | || || |
Sbjct 69091 CGCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCG 69150
Query 13889 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGA 13948
|||||||| |||||| ||||| || || | |||||| | ||||| || |||||
Sbjct 69151 TGATTGGGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACAC 69210
Query 13949 AGCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984
||||||| | ||| | || ||||||||||||||
Sbjct 69211 CCCCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 69246
>seq74
Length=1285146
Score = 134 bits (148), Expect = 2e-26
Identities = 251/360 (70%), Gaps = 14/360 (4%)
Strand=Plus/Plus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || |||||||| ||||| || || |||| ||| ||| | ||||||||||||
Sbjct 1090715 TTGATGATCAGACCCTTAATGTGCGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 1090774
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|| || || ||| | || || ||| | |||||||| || ||||||||||||
Sbjct 1090775 TTGCCGTAACGGAGCGAGTCGACGTCAGTGTAGACTTTACCCTGCTGCAGACCCAAGATC 1090834
Query 176843 TTCTTGAGATCG-TTGAACTCTTGGTTTGATGT-GAGCTGTG---TGACAGAGGCATCAC 176897
| ||||| ||| ||||| ||| || | ||| ||| | | || | | || ||||
Sbjct 1090835 TGCTTGA--TCGCTTGAA-TCTCGGCAT--TGTCGAGGAGGGCCTTGCCCGCCGCTTCAC 1090889
Query 176898 GAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAG 176957
| || || |||| || || | ||||||||||| |||| || ||||| || ||||
Sbjct 1090890 GCACGTTGAGCAACTTTCCTCGCAAGGGGAAGACACCATAGTTGTCTCGACCGACGACAG 1090949
Query 176958 AGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACT 177017
||||||| || ||||||| || || ||||| || || |||| |||||| || ||||
Sbjct 1090950 CCAGACCCGACACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACT 1091009
Query 177018 TG--CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAAT 177075
|| || | | | |||||| || | ||||||||| || | ||| || ||| || ||
Sbjct 1091010 TGGACCCGTTCCT--CGTACCAGCGTGGTTCGCATCCTCGAGCTTGACAAGACCCGTGAT 1091067
>seq82
Length=918051
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| || ||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 275541 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 275482
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 275481 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 275422
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| || ||||||||
Sbjct 275421 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATTCTCTTCAA 275362
Query 13772 CCATGAATCACC 13783
||| || || ||
Sbjct 275361 CCACGAGTCCCC 275350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741383534320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |