Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq79 181 1e-40 seq76 152 6e-32 seq74 134 2e-26 seq82 98.7 1e-15 >seq79 Length=1733205 Score = 181 bits (200), Expect = 1e-40 Identities = 534/809 (66%), Gaps = 23/809 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| ||||| |||| ||||| || | || || || || Sbjct 50368 CCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 50427 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 ||| || | ||| || |||||| | | || |||| |||||| | || || |||| Sbjct 50428 CTTGCAGTCGTACAACTTCATGTCCGAGCGCTAC-TTCACCCACGCCTCGCCGACGCTCT 50486 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||| || || || || || | || |||||||| | | | ||||| | Sbjct 50487 TCAACGCCGGAACGCCTCACCCGCAGCTCTCGTCCTGTTTCCTGGTCACGATGAAGGACG 50546 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 |||| || | ||||| |||| ||| |||| || || | ||||| ||| || | Sbjct 50547 ATTCGATTGAAGGCATCTACGACACACTCAAGACGTGCGCGCTCATCTCCAAGACCGCCG 50606 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTAC 111907 |||||||||| || |||||| | || | || | | | ||| || | | || || Sbjct 50607 GTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACC--GGCTCCTACATCGCCGGCAC 50664 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||||| | || | || || | || ||||| || || | ||| ||| |||||||| Sbjct 50665 GAATGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTA 50724 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||||| ||| ||||| | ||| | |||| |||| || ||||| || Sbjct 50725 CGTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTG 50781 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079 |||||| || || | |||||||| || | || ||||| || | ||||| | || Sbjct 50782 GCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCG 50841 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || | || |||||||||| |||||||||||||| |||||||||||| || | || ||| Sbjct 50842 CGCT--CGTGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAG 50899 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 | ||| | ||| | ||||| || || | | | || ||||| ||| ||| | | Sbjct 50900 GCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTAC 50959 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259 || || |||||| | | | | | || ||||| | || | || || | |||| Sbjct 50960 GGCGAAGAGTTTCGCGTCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACG 51019 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 | || || || | | | ||| | || |||||| | | || ||| || || | || Sbjct 51020 ATCCCCGC-GCAAAAGCTTTGGTATGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCC 51078 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGA-GTAATCAAAAGAATTTGGGTGTGA 112377 | ||||| ||||| |||| ||| || ||||| | || |||||||| | || || Sbjct 51079 GTTCATGCTCTACAAGGACG-CTGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGA 51137 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATC 112406 ||||| || ||||| || || |||||| Sbjct 51138 TCAAGTCGTCGAACCTTTGCACTGAAATC 51166 >seq76 Length=1206387 Score = 152 bits (168), Expect = 6e-32 Identities = 276/396 (70%), Gaps = 6/396 (2%) Strand=Plus/Plus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| |||||||| | || ||| ||| ||| ||||| |||| | || ||| Sbjct 68854 CCGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATC 68913 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATT 13710 |||| ||| ||||||||||| || ||| ||||||||| | ||| | | ||| | Sbjct 68914 CGAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGG-TTTCT 68972 Query 13711 GGCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCA 13770 || |||| ||||| ||||||||||| |||| ||| |||||| ||| ||| | |||| Sbjct 68973 GGATCGTCAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCA 69032 Query 13771 ACCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTAT 13828 |||| || || ||| | || ||| ||| ||| || || | |||||| | ||| | | | Sbjct 69033 ACCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATCTCGCGA-GCTGT 69090 Query 13829 CAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 13888 | | ||| | ||| || |||| | | | | | || ||||| | || || | Sbjct 69091 CGCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCG 69150 Query 13889 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGA 13948 |||||||| |||||| ||||| || || | |||||| | ||||| || ||||| Sbjct 69151 TGATTGGGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACAC 69210 Query 13949 AGCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984 ||||||| | ||| | || |||||||||||||| Sbjct 69211 CCCCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 69246 >seq74 Length=1285146 Score = 134 bits (148), Expect = 2e-26 Identities = 251/360 (70%), Gaps = 14/360 (4%) Strand=Plus/Plus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| || |||||||| ||||| || || |||| ||| ||| | |||||||||||| Sbjct 1090715 TTGATGATCAGACCCTTAATGTGCGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 1090774 Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842 || || || ||| | || || ||| | |||||||| || |||||||||||| Sbjct 1090775 TTGCCGTAACGGAGCGAGTCGACGTCAGTGTAGACTTTACCCTGCTGCAGACCCAAGATC 1090834 Query 176843 TTCTTGAGATCG-TTGAACTCTTGGTTTGATGT-GAGCTGTG---TGACAGAGGCATCAC 176897 | ||||| ||| ||||| ||| || | ||| ||| | | || | | || |||| Sbjct 1090835 TGCTTGA--TCGCTTGAA-TCTCGGCAT--TGTCGAGGAGGGCCTTGCCCGCCGCTTCAC 1090889 Query 176898 GAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAG 176957 | || || |||| || || | ||||||||||| |||| || ||||| || |||| Sbjct 1090890 GCACGTTGAGCAACTTTCCTCGCAAGGGGAAGACACCATAGTTGTCTCGACCGACGACAG 1090949 Query 176958 AGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACT 177017 ||||||| || ||||||| || || ||||| || || |||| |||||| || |||| Sbjct 1090950 CCAGACCCGACACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACT 1091009 Query 177018 TG--CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAAT 177075 || || | | | |||||| || | ||||||||| || | ||| || ||| || || Sbjct 1091010 TGGACCCGTTCCT--CGTACCAGCGTGGTTCGCATCCTCGAGCTTGACAAGACCCGTGAT 1091067 >seq82 Length=918051 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| || ||||| | || ||| ||| || ||||| ||| | || || Sbjct 275541 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 275482 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||||||||| |||||| |||||||||| | ||| | || || Sbjct 275481 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 275422 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| ||| || ||| ||| || |||||||| Sbjct 275421 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATTCTCTTCAA 275362 Query 13772 CCATGAATCACC 13783 ||| || || || Sbjct 275361 CCACGAGTCCCC 275350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741383534320