Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq79 143 3e-29 >seq79 Length=1733205 Score = 143 bits (158), Expect = 3e-29 Identities = 434/659 (66%), Gaps = 10/659 (2%) Strand=Plus/Minus Query 110375 CCAAG-TTCTTCTGATTCGATTTGGAGTT-GCATGCATCCTTATAGAGCATGTATGGGGT 110432 ||||| ||||| || |||||||| ||| ||| || ||||| ||||||||| | ||| | Sbjct 51132 CCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA-GCGTCCTTGTAGAGCATGAACGGGTT 51074 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTG 110491 || ||||| ||| | | |||||| || | ||| | | | ||| |||||| || Sbjct 51073 GCCGGTTTCGACCTGGGCTTCGAGAATCGCATACCAAAGCTTTTGCG-CGGGGATCGTCT 51015 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 || ||| | || |||| ||||| || | ||||| | ||| || | ||||| | Sbjct 51014 TCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAAACTCTTCGCCGTAGA 50955 Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611 | || || || || | | |||| |||||||||| ||| | || | |||| | Sbjct 50954 CTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGGCCTCGA 50895 Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCT 110671 | | || |||||| || || |||||||| | || |||| || ||||| || | | Sbjct 50894 CACGCTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTT 50835 Query 110672 CTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTT 110731 | || | || ||||| ||| || |||| || || | || || | |||||| || | Sbjct 50834 CCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCT 50775 Query 110732 CGAGATAGACAGCGATGGATCCCTTACGACGAC--CCGCCT-GGTTAACATAGCGTGCTG 110788 |||| |||| |||| || ||| ||| || ||| ||| || ||||| || | Sbjct 50774 CGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGG 50715 Query 110789 TGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAA 110848 || ||| |||| | |||||| || | || || | || | ||||| || || | Sbjct 50714 TGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCATTCGTGCCGGCGA 50655 Query 110849 TTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTAC 110908 | ||| | || || |||| |||||| || ||| |||||||| || ||| Sbjct 50654 TGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGG 50595 Query 110909 TAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTG 110967 || | || ||| ||| ||||||| | || || || ||||||||||| |||| | Sbjct 50594 AGATGAGCGCGCACGTCT-TGAGTGTGTCGTAGATGCCTTCAATCGAATCGTCCTTCATC 50536 Query 110968 GCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 | | || || || || || | ||| || |||||||||| || |||||||| || || Sbjct 50535 GTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGG 50477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975035551800