Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq70 159 8e-34
seq85 149 1e-30
seq74 136 9e-27
>seq70
Length=1260279
Score = 159 bits (176), Expect = 8e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
||||| || ||||| || ||||| |||||||||| || || | || || |||||||||
Sbjct 437976 TGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAGAGCGTGCGACCGTCCTCGAGCTGC 438035
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| | ||| ||||||||||| |||||||| || ||||||||||| ||
Sbjct 438036 TTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTG 438095
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||||||| || || ||||| || || || || || |||| |||||| || |||
Sbjct 438096 GTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTAATCGTCTTGCCGGTC 438155
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 438156 AGCGTCTTGACGAAAATTTGCAT 438178
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || |||||||| || || || | || || ||||||||
Sbjct 438431 GTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCCTCGAGCTG 438490
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | ||| || |||||||| |||||||| || ||||||||||| ||
Sbjct 438491 CTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTT 438550
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || ||||| || || || || ||||| | |||||| || ||
Sbjct 438551 GGTCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTCTTGCCAGT 438610
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| ||||| ||||| | ||||||
Sbjct 438611 GAGCGTTTTAACGAAGATTTGCAT 438634
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || || || || ||||| ||||| |||| || || | || || ||||||||
Sbjct 680102 GTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTG 680161
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| | ||| || ||||| || |||||||| || ||||| || || ||
Sbjct 680162 CTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 680221
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || |||||||| || || || || || | |||||| |||||
Sbjct 680222 GGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCTGT 680281
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|||||| || ||||| | ||||||
Sbjct 680282 CAAAGTCTTGACGAAAATTTGCAT 680305
Score = 131 bits (144), Expect = 4e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||| | || || | ||| || || || || || ||||| ||||| |||| || ||
Sbjct 679628 TCGGAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGT 679687
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || || |||||||||||||| |||||||| | ||| || ||||| |||||||||||
Sbjct 679688 GCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCC 679747
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || |||||| || || || ||||| || || || || ||
Sbjct 679748 CTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACCTCGAG 679807
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | |||||| || |||| || || ||||| | ||||||
Sbjct 679808 CGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 679849
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || ||||| ||||| |||| || || | || || || | |||
Sbjct 438203 GTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCCAACTG 438262
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || || ||||||||||| |||||||| || ||||||||||| ||
Sbjct 438263 CTTGCCCGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTT 438322
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || ||||| || || || || || || | |||||| || ||
Sbjct 438323 GGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGT 438382
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || || || | ||||||
Sbjct 438383 GAGCGTCTTGACAAAGATTTGCAT 438406
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || || || || ||||| ||||| |||| || || | || || ||||||||
Sbjct 679874 GTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTG 679933
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| | ||| || ||||| || |||||||| || ||||| || || ||
Sbjct 679934 CTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 679993
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| || || || ||||| || || || || || || | |||||| || ||
Sbjct 679994 GGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 680053
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 680054 CAGCGTCTTGACGAAAATTTGCAT 680077
>seq85
Length=620530
Score = 149 bits (164), Expect = 1e-30
Identities = 154/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| ||||| || ||||| || || ||||| | ||||| ||||||||
Sbjct 151177 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGAGCTG 151118
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || ||||| |||||||| || |||||||| |||||||| || ||
Sbjct 151117 CTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 151058
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || ||||| || || || || ||||| | |||||| || ||
Sbjct 151057 GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 150998
Query 195117 CAAAGTTTTTACGAACACTTGC 195138
| ||| || ||||| | ||||
Sbjct 150997 AAGAGTCTTGACGAAGATTTGC 150976
>seq74
Length=1285146
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| ||||| || ||||| || || ||||| | ||||| ||||||||
Sbjct 284704 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGAGCTG 284645
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || ||||| ||||| || || |||||||| |||||||| || ||
Sbjct 284644 CTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTGGATCTT 284585
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| || || ||||| || || || || ||||| | ||||| || ||
Sbjct 284584 GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 284525
Query 195117 CAAAGTTTTTACGAACACTTGCA 195139
| || || ||||| | |||||
Sbjct 284524 GAGGGTCTTGACGAAGATTTGCA 284502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479737804477
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |