Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq70 127 2e-24
>seq70
Length=1260279
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||||||| ||||| ||| || ||||| |||||||| || || | |||
Sbjct 437961 AGACGGAGCACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAGAGCGTGCGA 438020
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| ||||||||| || | ||||| |||||||
Sbjct 438021 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCC 438080
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | ||||||| ||| ||||| | ||||
Sbjct 438081 TTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTA 438140
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || |||| || || || ||||| |||||
Sbjct 438141 ATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 438178
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | || || | |||||| || ||||| ||| || ||||| ||||| || ||
Sbjct 438180 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 438239
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | ||| |||| ||||||||||| || ||||| || || |||||||| || | ||||
Sbjct 438240 AGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAAGATGAGACGCTGTTGGTCTGGGGGA 438299
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||||||||| |||||| || || | | | ||||||| ||| |||
Sbjct 438300 ATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACC 438359
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | ||| ||||| || || || | || || ||||| || |||||
Sbjct 438360 TCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACAAAGATTTGCAT 438406
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | || || | |||||| || ||||| || || ||||| ||||| || ||
Sbjct 680079 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAG 680138
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | ||| |||| || | ||||||||| || || |||| |||||| || || | ||||
Sbjct 680139 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGA 680198
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||||||||| ||||| || || | | | || || | ||| |||
Sbjct 680199 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 680258
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
|| | ||| ||||| || || |||||||| || || ||||| ||||||
Sbjct 680259 TCGAGCGTGATCGTCTTGCCTGTCAAAGTCTTGACGAAAATTTGCATC 680306
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | || |||| |||||| || ||||| || || ||||| ||||| || ||
Sbjct 679623 CCGCCTCGGAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAG 679682
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | ||| |||| || | ||||||||| || || |||| |||||| || || | |||
Sbjct 679683 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 679742
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||||||||| ||||| || ||| | | | ||||| | ||| |||
Sbjct 679743 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACC 679802
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | ||| ||||| || || |||| || || || ||||| |||||
Sbjct 679803 TCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 679849
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | || || | |||||| || ||||| || || ||||| ||||| || ||
Sbjct 679851 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAG 679910
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | ||| |||| || | ||||||||| || || |||| |||||| || || | ||||
Sbjct 679911 AGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGA 679970
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||||||||| ||||| || ||| | | | ||||| | ||| |||
Sbjct 679971 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACC 680030
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | ||| ||||| || || |||| || || || ||||| |||||
Sbjct 680031 TCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 680077
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || ||||| ||| || || || |||||||| | || | ||
Sbjct 438417 AGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGG 438476
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || || || |||| |||||| || || | ||||| |||||||
Sbjct 438477 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCC 438536
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | ||||| | ||| ||||| | ||
Sbjct 438537 TTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCGAGGGTG 438596
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
||||| || || || | ||||| || || || ||||||
Sbjct 438597 ATCGTCTTGCCAGTGAGCGTTTTAACGAAGATTTGCATC 438635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936991809313
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |