Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq79 187 3e-42 seq76 123 3e-23 seq82 105 8e-18 >seq79 Length=1733205 Score = 187 bits (206), Expect = 3e-42 Identities = 560/858 (65%), Gaps = 15/858 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| ||||| ||||||||||||| | ||||| || || Sbjct 50368 CCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 50427 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 |||| || | ||| || |||||| | | |||| ||||| | || || ||||| Sbjct 50428 CTTGCAGTCGTACAACTTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTT 50487 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || || || |||||| | || || ||||| || | | ||||| || Sbjct 50488 CAACGCCGGAACGCCTCACCCGCAGCTCTCGTCCTGTTTCCTGGTCACGATGAAGGACGA 50547 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | || ||||| | || || | | ||| |||| ||||| ||| || || Sbjct 50548 TTCGATTGAAGGCATCTACGACACACTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 50607 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508 ||||| || || |||||| | | | || | ||| || ||| || || Sbjct 50608 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCCGGCACG 50665 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 ||||| | || | || || | || ||||| || || | ||| ||| |||||||| Sbjct 50666 AATGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 50725 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | |||| || ||||| | || || ||||| ||||| | || || ||| Sbjct 50726 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGG 50782 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | |||||||| || | || ||||| || | || || | || Sbjct 50783 CACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGC 50842 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | |||||||| | | || |||||||| || || |||||| |||| || |||| Sbjct 50843 GCTCGTGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCC 50902 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 | || | ||| | || ||||| || | | | || || || ||| ||| | || Sbjct 50903 GCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTACGGC 50962 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || |||||| | | | | | || || ||| ||||||| | ||||| ||| | Sbjct 50963 GAAGAGTTTCGCGTCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATC 51022 Query 75863 CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 || || || | | ||||| | || |||||| || | ||| || || || | || | Sbjct 51023 CCCGC-GCAAAAGCTTTGGTATGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTT 51081 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 ||||| |||||||| ||| ||||| || ||||||||||| | || || ||||| Sbjct 51082 CATGCTCTACAAGGACGCTGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAA 51141 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || || |||||||| ||||| | |||||| | | ||| ||| || ||||| Sbjct 51142 GTCGTCGAACCTTTGCACTGAAATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTTTG 51201 Query 76042 CAATTTGGCATCAATCGC 76059 ||| ||||| || ||||| Sbjct 51202 CAACTTGGCCTCGATCGC 51219 >seq76 Length=1206387 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 |||||| | ||||| ||| | ||| || | ||| || ||||||||||| | ||| ||| Sbjct 69078 ATCTTCCTCGTGACGAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGATACCG 69019 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || |||||| | || || || ||||| || ||||||| |||| | || ||| Sbjct 69018 TTGCATGCGTACATATCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAACCGTACAAC 68959 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || || || || ||||||||||| ||| ||| | ||| || || || Sbjct 68958 TTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGGTCTCC 68899 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || ||| ||| ||| || || ||||||||||| Sbjct 68898 ACGACCTTGCCATACAACTCGGAGGTCGAGGCTTGGTA 68861 >seq82 Length=918051 Score = 105 bits (116), Expect = 8e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||| ||| | || || | || || |||||||||||||| || ||| Sbjct 275317 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGAATACCG 275376 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 275377 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 275436 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 275437 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 275496 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 275497 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 275534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568623117280