Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq79 241 2e-57
seq84 116 5e-20
seq70 105 8e-17
seq48 89.7 6e-12
>seq79
Length=1733205
Score = 241 bits (266), Expect = 2e-57
Identities = 338/471 (72%), Gaps = 19/471 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||||||||| |||| ||| |||| ||||||||||| |||| |||||| ||
Sbjct 50733 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 50674
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| ||| || ||||| || | ||||| ||||| ||||| | ||||| | || |||
Sbjct 50673 TAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 50614
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 50613 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAGATGCCTTCA 50554
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
||||| ||| ||||||| || || || || |||||| |||||||| | ||| |||
Sbjct 50553 ATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCG 50494
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA-GGT 1630364
|||||||||||||| |||| || |||||| | || |||||| || ||| |
Sbjct 50493 GCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGTACGAC 50434
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
|| || |||||| || | |||| | || | | ||||| ||||||
Sbjct 50433 TGCAAG-ACGCGC------------TCGATGTCGTGA---CCGTGGATGCCGACGGCGAC 50390
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCG-CGCACCTTGGTCAGGTAGG 1630483
||||||||||||| ||| || || ||| |||| |||| || | | || |||||
Sbjct 50389 ACGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAG-CAAGTAGG 50331
Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534
| || | ||| ||| |||||||||| || | |||||||||||||
Sbjct 50330 AGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGT 50280
Score = 138 bits (152), Expect = 1e-26
Identities = 297/450 (66%), Gaps = 2/450 (0%)
Strand=Plus/Minus
Query 1628152 GGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTC 1628211
|||| ||| ||| || ||| || ||||| ||||| | |||| | |||| || ||||||
Sbjct 51183 GGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTC 51124
Query 1628212 TGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCG 1628271
| ||||| | | ||| | |||||||||| ||||||| | || |||||| |||
Sbjct 51123 TTTTGGTTCGATTTTTTGTTTGCAGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCG 51064
Query 1628272 ATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCA-CGACAGTCCGCGCGCG 1628330
| ||| || ||| || || |||| | || ||||||| | || | || |||||
Sbjct 51063 ACCTGGGCTTCGAGAATCGCATACCAAAGCTTTTGCGCGGGGATCGTCT-TCTTGGCGCG 51005
Query 1628331 GCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAG 1628390
||||| ||| | |||||||| ||||| ||
Sbjct 51004 GCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAG 50945
Query 1628391 GCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCAT 1628450
|||||| || |||| || || ||||| | ||||||||| ||| | | | || |||
Sbjct 50944 GCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCAT 50885
Query 1628451 AAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCC 1628510
||||| || |||| || || | ||||| || || || ||| |||||||||||
Sbjct 50884 GAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCC 50825
Query 1628511 GTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCA 1628570
||||||||| ||||| || | |||| | |||||||||||||||||| ||||||
Sbjct 50824 GTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGAT 50765
Query 1628571 GGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
|| ||||| || |||||| ||| ||
Sbjct 50764 CGCGAAGGCTCCGGGACGCTTGTTGCCACC 50735
Score = 109 bits (120), Expect = 7e-18
Identities = 171/242 (71%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040
|||||||||||| |||| ||| || || |||||| | ||||||| |||||||||||
Sbjct 52341 CTGGTCGACGGTGAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCC 52282
Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGC 1627100
||||| || || || ||| ||||| |||||||||||||| || | ||||
Sbjct 52281 CGTCTTCAGTCCTCGCTTCCAACCGTAGAAGTGCATCGACGTGAGCTGCGCCATTGTCGG 52222
Query 1627101 G-TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCG 1627159
| ||| | ||| | ||||||||| || |||||| | ||| | || ||||| |
Sbjct 52221 GCTCGAC-AAGTGGATGTTGAGCGATTGCGACTGGTCAATGAAGGCACCTCGGTCGGCGG 52163
Query 1627160 CCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219
|| ||||| || | | | | |||||| ||||||||| ||||||||||||| |
Sbjct 52162 ACAGATCGATAATGGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 52103
Query 1627220 CG 1627221
||
Sbjct 52102 CG 52101
>seq84
Length=2026012
Score = 116 bits (128), Expect = 5e-20
Identities = 135/181 (75%), Gaps = 6/181 (3%)
Strand=Plus/Plus
Query 1254365 GATCAGGCGCACGGCGGTCTGGATCTCGCG---CGTGCCGATCGTGTTGCGCTTGTTCGA 1254421
||||| || || | ||||||||||||||| || | | ||| ||||| |||| |
Sbjct 1186170 GATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGCGGTTGT---A 1186226
Query 1254422 GTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1254481
|| ||| || || ||||||||| ||||||| |||| ||||| ||||| ||||||||
Sbjct 1186227 GTTCGCGAGCTTGCACGCCTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTT 1186286
Query 1254482 CATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1254541
| || | ||||| |||||| ||||| || |||||||| |||||||| | ||||||
Sbjct 1186287 GAGGATCAGCATCGCCTTGTTCGAGATACCGGTATCGGGGTGGACCTGCTTCAACACCTT 1186346
Query 1254542 G 1254542
|
Sbjct 1186347 G 1186347
Score = 116 bits (128), Expect = 5e-20
Identities = 135/181 (75%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 1254365 GATCAGGCGCACGGCGGTCTGGATCTCGCG---CGTGCCGATCGTGTTGCGCTTGTTCGA 1254421
||||| || || | ||||||||||||||| || | | ||| ||||| |||| |
Sbjct 1234170 GATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGCGGTTGT---A 1234114
Query 1254422 GTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1254481
|| ||| || || ||||||||| ||||||| |||| ||||| ||||| ||||||||
Sbjct 1234113 GTTCGCGAGCTTGCACGCCTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTT 1234054
Query 1254482 CATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1254541
| || | ||||| |||||| ||||| || |||||||| |||||||| | ||||||
Sbjct 1234053 GAGGATCAGCATCGCCTTGTTCGAGATACCGGTATCGGGGTGGACCTGCTTCAACACCTT 1233994
Query 1254542 G 1254542
|
Sbjct 1233993 G 1233993
Score = 109 bits (120), Expect = 7e-18
Identities = 147/201 (73%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCG---CGTGCCGA 1254402
||| ||| || || | | ||||| || || ||||||||||||||||| || | |
Sbjct 1522163 TGGACAGCTCTCCAGGGAGGATCAATCGGACCGCGGTCTGGATCTCGCGCGACGAGATGG 1522222
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
||| ||||| |||| ||| ||| || | ||||||||| ||||||| || | |
Sbjct 1522223 TCGACTTGCGGTTGT---AGTTCGCGAGCTTGGACGCCTCGGTGACGATGCGTTCAAAGA 1522279
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGA-CATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521
|||| ||||| |||||||| | || || ||||| |||||| ||||| ||| |||||||
Sbjct 1522280 TGTCATTGACGAACGAGTTGA-GAATGAGCATCGCCTTGTTCGAGATACCCGTGTCGGGG 1522338
Query 1254522 TGCACCTGCTTGAGCACCTTG 1254542
|| || ||||| | ||| |||
Sbjct 1522339 TGGACTTGCTTCAACACTTTG 1522359
>seq70
Length=1260279
Score = 105 bits (116), Expect = 8e-17
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| || ||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 929457 ATCGGTGGTACGGTCACGTGCGTCATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCCGTG 929516
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || ||| | ||||||||||||||||||||||| || ||||||||
Sbjct 929517 -TTCGACAAGCTGGAAGCCCTCTTGGCCCACGCCATGCTGTCGATCCCCGCGACCAAGGG 929575
Query 19172 ATTCGAGATTGG 19183
|||||||||||
Sbjct 929576 TTTCGAGATTGG 929587
>seq48
Length=317269
Score = 89.7 bits (98), Expect = 6e-12
Identities = 161/232 (69%), Gaps = 5/232 (2%)
Strand=Plus/Plus
Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTC-CTTCATGAACCGGC 869711
|||||| || || |||||| |||| |||| || || ||||| ||| | |||||
Sbjct 262868 GATCTGAAACCCATAAAAGCACCTCGCCTCGGCGGACTGCACCTCGCTTGA-GAACCTCT 262926
Query 869712 CGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGA 869771
|| |||| ||||| ||| | || || ||||||||||| || || ||||| ||
Sbjct 262927 CGACCAGATTCTCATTCACAACCCCATCCGAAGCGGCGAAAAAGGCGAGCACGTGGGCGA 262986
Query 869772 TAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGT 869828
|||||| ||| ||||||| | ||||| ||||| | | |||| || |||||
Sbjct 262987 TAAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGT 263046
Query 869829 CCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880
| | ||| ||||||| ||| | || || | ||| | ||||||||| ||||
Sbjct 263047 CGATCTCTTCGGCGGACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCA 263098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107128449526527
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |