Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq79 192 9e-43
seq84 132 8e-25
seq82 114 2e-19
seq48 114 2e-19
seq70 95.1 2e-13
>seq79
Length=1733205
Score = 192 bits (212), Expect = 9e-43
Identities = 198/259 (76%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|||||||| |||||||| |||| ||| |||| ||||||||||| || | |||||| ||
Sbjct 50733 TGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 50674
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
| ||| || ||||| || | ||||| ||| | ||||| | ||||| | || |||
Sbjct 50673 TAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 50614
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || ||||| | ||||||||||||||||||| | || || || ||||||||||| ||
Sbjct 50613 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAGATGCCTTCA 50554
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
||||| ||| ||||||| | ||| || || |||||| |||||| | | ||| |||
Sbjct 50553 ATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCG 50494
Query 2073781 GCATTGAAGAGCGTGGGCG 2073799
|| ||||||||||| ||||
Sbjct 50493 GCGTTGAAGAGCGTCGGCG 50475
Score = 149 bits (164), Expect = 1e-29
Identities = 301/450 (67%), Gaps = 2/450 (0%)
Strand=Plus/Minus
Query 2071564 GGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTC 2071623
|||| ||| ||| || || || ||||| ||||| | |||| | | ||||| ||||||
Sbjct 51183 GGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTC 51124
Query 2071624 TGCTGGTT-GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTC 2071682
| ||||| | | | | ||| | |||||||||| |||||| | || || || ||
Sbjct 51123 TTTTGGTTCGATTTTTTGTTTG-CAGCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTC 51065
Query 2071683 GATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCG 2071742
|| ||| || || || || |||||| | ||||||| | || || | |||||
Sbjct 51064 GACCTGGGCTTCGAGAATCGCATACCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCGCG 51005
Query 2071743 GCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAG 2071802
||||| | | | || ||| | |||||| | ||||| ||
Sbjct 51004 GCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAAACTCTTCGCCGTAGACTTCGTGGAG 50945
Query 2071803 GCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCAT 2071862
|||||| || |||| ||||| ||||| | |||||||||| | | | | || || |||
Sbjct 50944 GCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCAT 50885
Query 2071863 AAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCC 2071922
|| || ||| |||| || | | |||||||| || || ||| |||||||||||
Sbjct 50884 GAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACGAGCGCGGACTTCCTCCTTGCC 50825
Query 2071923 GTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCA 2071982
||||||||| ||||| || | |||| || |||||||||||||||||| ||||||
Sbjct 50824 GTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGAT 50765
Query 2071983 GGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|| ||||| || |||||| ||| ||
Sbjct 50764 CGCGAAGGCTCCGGGACGCTTGTTGCCACC 50735
Score = 107 bits (118), Expect = 3e-17
Identities = 175/245 (71%), Gaps = 14/245 (6%)
Strand=Plus/Minus
Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310
||||||||||| |||| ||| || | |||| | || ||||||| |||||||||||
Sbjct 52340 TGGTCGACGGTGAACTTGATCGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATGCCC 52281
Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT--TCG 2069368
||||| || || || ||| ||||| |||||||||||||| | || ||| |||
Sbjct 52280 GTCTTCAGTCCTCGCTTCCAACCGTAGAAGTGCATCGACGTGA--GCTGCGCCATTGTCG 52223
Query 2069369 GG-ACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427
|| || || ||| || ||||||||| || |||||| | ||| | ||||||||
Sbjct 52222 GGCTCGACA-AGTGGATGTTGAGCGATTGCGACTGGTCAATGAAGGCACCTCGGTCGGCG 52164
Query 2069428 GCCATGTCG---ATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTT 2069483
| || ||| ||||| | ||| || | |||||| ||||||||| | | ||||||
Sbjct 52163 GACAGATCGATAATGGT----CTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTT 52108
Query 2069484 GAGAT 2069488
|||||
Sbjct 52107 GAGAT 52103
Score = 93.3 bits (102), Expect = 7e-13
Identities = 141/196 (72%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCCGGCGCTCT 2070109
||| || |||||||| ||||| ||||| ||| |||||| ||||| ||| |
Sbjct 51484 CGCGGCGTGGTAGATGGTCTCGAAGATC-TGCTTGTTGAGCTTGCGCGCCTCGGGTGAAT 51426
Query 2070110 CCCACGGCAGGTCCATCATGGCA--AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCAT 2070167
| |||||| ||| | | || ||||||||||| || || ||||| |||| ||| ||
Sbjct 51425 CGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCGAT 51368
Query 2070168 CGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227
|| |||||||| | ||| |||| | | |||||| || ||||||| ||||| ||| ||
Sbjct 51367 GGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGGTAGTAGTTGACGTCAAT 51308
Query 2070228 CACGCGGTTGAGGTTG 2070243
| |||||| | ||||
Sbjct 51307 GATGCGGTTCAAGTTG 51292
>seq84
Length=2026012
Score = 132 bits (146), Expect = 8e-25
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 1485482 CGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCA 1485541
|| |||| || ||||| |||| |||||| ||| || || || | | ||||| || |
Sbjct 1186121 CGACCTTTGTGCCCTCCGAGATGGCGTGTTTGGATAGCTCTCCAGGGAGGATCAATCGGA 1186180
Query 1485542 CGGCGGTCTGGATCTCGCG---GGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGC 1485598
| | ||||||||||||||| | | | ||| ||||| ||| |||| |||| ||
Sbjct 1186181 CCGAGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGCGGTTG-TAGTTCGCG--AGCT 1186237
Query 1485599 GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACA 1485658
|| ||||||||| ||||||| |||| ||||| ||||| |||||||| | |||| ||
Sbjct 1186238 TGCACGCCTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTTGAGGATCAGCA 1186297
Query 1485659 TCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||| ||||| ||||| || |||||||| |||||||| | |||||||
Sbjct 1186298 TCGCCTTGTTCGAGATACCGGTATCGGGGTGGACCTGCTTCAACACCTTG 1186347
Score = 132 bits (146), Expect = 8e-25
Identities = 169/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 1485482 CGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCA 1485541
|| |||| || ||||| |||| |||||| ||| || || || | | ||||| || |
Sbjct 1234219 CGACCTTTGTGCCCTCCGAGATGGCGTGTTTGGATAGCTCTCCAGGGAGGATCAATCGGA 1234160
Query 1485542 CGGCGGTCTGGATCTCGCG---GGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGC 1485598
| | ||||||||||||||| | | | ||| ||||| ||| |||| |||| ||
Sbjct 1234159 CCGAGGTCTGGATCTCGCGCGACGAGATGGTCGCCTTGCGGTTG-TAGTTCGCG--AGCT 1234103
Query 1485599 GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACA 1485658
|| ||||||||| ||||||| |||| ||||| ||||| |||||||| | |||| ||
Sbjct 1234102 TGCACGCCTCGGTGGCGATGCGCTCGAAGATGTCATTGACGAACGAGTTGAGGATCAGCA 1234043
Query 1485659 TCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||| ||||| ||||| || |||||||| |||||||| | |||||||
Sbjct 1234042 TCGCCTTGTTCGAGATACCGGTATCGGGGTGGACCTGCTTCAACACCTTG 1233993
Score = 118 bits (130), Expect = 2e-20
Identities = 164/227 (72%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
|||| || || || |||| |||||| ||| ||| || || | | ||||| || || |
Sbjct 1522136 CCTTTGTGCCTTCCGAGATGGCGTGTTTGGACAGCTCTCCAGGGAGGATCAATCGGACCG 1522195
Query 1485545 CGGTCTGGATCTCGCG---GGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGC 1485601
|||||||||||||||| | | | ||| ||||| ||| |||| |||| || |
Sbjct 1522196 CGGTCTGGATCTCGCGCGACGAGATGGTCGACTTGCGGTTG-TAGTTCGCG--AGCTTGG 1522252
Query 1485602 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCG 1485661
||||||||| ||||||| || | ||||| ||||| |||||||| | || |||||
Sbjct 1522253 ACGCCTCGGTGACGATGCGTTCAAAGATGTCATTGACGAACGAGTTGAGAATGAGCATCG 1522312
Query 1485662 ATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| ||| ||||||||| || ||||| | ||| |||
Sbjct 1522313 CCTTGTTCGAGATACCCGTGTCGGGGTGGACTTGCTTCAACACTTTG 1522359
>seq82
Length=918051
Score = 114 bits (126), Expect = 2e-19
Identities = 152/208 (73%), Gaps = 5/208 (2%)
Strand=Plus/Plus
Query 796141 AAACACCTGGCCTCGG-GTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGC 796199
|| |||| ||||||| | ||| ||||||| ||| || || ||| |||||||
Sbjct 77873 AAGCACCGAGCCTCGGCGGACT-GGACCTCACCGGAGAATCGCTCGACCAAGTTCTCATT 77931
Query 796200 CACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC 796259
|||||||||||| |||||||||||||||||||||||| ||| |||| ||||||||
Sbjct 77932 GACGATGCCGTCGGACGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCGTC 77991
Query 796260 GTCGCTGAG---CGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGT 796316
| |||| | |||||| | | |||| | | ||| | ||| ||||||||
Sbjct 77992 GGGCTTGAGTTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTCCATCTCTTCGGCGGT 78051
Query 796317 CCAAAAGGAGGCCTCGGCCTTTTTGTAC 796344
|||||| || ||||||||||| ||||||
Sbjct 78052 CCAAAACGATGCCTCGGCCTTCTTGTAC 78079
>seq48
Length=317269
Score = 114 bits (126), Expect = 2e-19
Identities = 162/222 (73%), Gaps = 7/222 (3%)
Strand=Plus/Plus
Query 796140 AAAACACCTGGCCTCGG-GTACTTGGACCTC-CTTCATGAAGCGGCCGGCCAGGTTCTCA 796197
||| ||||| ||||||| | ||| | ||||| ||| | ||| | || |||| ||||||
Sbjct 262883 AAAGCACCTCGCCTCGGCGGACT-GCACCTCGCTTGA-GAACCTCTCGACCAGATTCTCA 262940
Query 796198 GCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCG 796257
||| | || || ||||||||||||||||| ||||| |||||||| || |||
Sbjct 262941 TTCACAACCCCATCCGAAGCGGCGAAAAAGGCGAGCACGTGGGCGATAAAGTAGCGTTCG 263000
Query 796258 TCGTCGCTGAGCGAGAC---CCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCG 796314
|||| | ||||| | ||||| | |||| ||||||||||| ||| ||||||
Sbjct 263001 TCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTCGATCTCTTCGGCG 263060
Query 796315 GTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356
| ||||||||| || | ||| | ||||||||| |||| |||
Sbjct 263061 GACCAAAAGGACGCTTGGGCTTGTTTGTACATGGCCCAGATC 263102
>seq70
Length=1260279
Score = 95.1 bits (104), Expect = 2e-13
Identities = 199/294 (68%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 2019147 GACGTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGC 2019206
|||||||| || | ||||||| | |||| ||||| || || || | ||
Sbjct 845691 GACGTCGTACGCAACCGCATCAAGGCTTTCGCTCAGAAAAAGGTCACACTCCCATCGGGT 845632
Query 2019207 CGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCC 2019266
||||||||| | |||||||||| || ||||||| | || ||| ||||| || ||
Sbjct 845631 CGCCACAAGCTCGTCATCCTCGACGAAGCCGACTCGATGACCCCGGGAGCCCAACAAGCG 845572
Query 2019267 CTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACG 2019326
|||||| ||| ||||||| | | ||||||| || || || || | || |||||| |
Sbjct 845571 CTCCGAAGGACGATGGAAATCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACCAG 845512
Query 2019327 TCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTC 2019386
| | ||||||| | | ||||| || |||||||||||| | | || | |||
Sbjct 845511 AGCAACAAGATCATCGAGCCGATTCAGAGTCGATGCGCCATCTTGAGGTACTCGAGGCTC 845452
Query 2019387 ACCGACGCCCAGATCGCCG-CGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439
|| || ||| || | || | |||| ||| |||||| ||| ||||||||
Sbjct 845451 ACTGATGCCGAG-TTGCTGAGGCGTTTGCTGGAGATTTGCGAGATTGAAAAGGT 845399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916232464932509
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