Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq74 120 2e-22 seq85 118 7e-22 seq70 107 1e-18 >seq74 Length=1285146 Score = 120 bits (132), Expect = 2e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| || ||||| ||||||| || |||| |||| Sbjct 284712 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 284653 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || ||||||||||| | || | || |||||||| Sbjct 284652 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCT 284593 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| |||||| Sbjct 284592 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 284533 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 || |||||||||||||| || ||||| |||| Sbjct 284532 TTGCCCGTGAGGGTCTTGACGAAGATTTGCA 284502 >seq85 Length=620530 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| |||||| || ||||| ||||||| || |||| |||| Sbjct 151185 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 151126 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 151125 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 151066 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 151065 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 151006 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| || ||||| || ||||| ||| || Sbjct 151005 TTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 150973 >seq70 Length=1260279 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || |||| | || |||| ||||| || || || Sbjct 438215 CTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAA 438274 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||| || || || |||||| | || | ||||||||||| || | | || || |||||| Sbjct 438275 GATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 438333 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | || || ||||| || ||||| ||||| | Sbjct 438334 TGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTGA 438393 Query 34965 CAAAGATCTGCAT 34977 ||||||| ||||| Sbjct 438394 CAAAGATTTGCAT 438406 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || |||| || |||| | || || || ||||| || ||||| Sbjct 438443 CTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 438502 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||||| ||| ||||||||| | || | ||||||||||| || | | || || |||||| Sbjct 438503 GATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 438561 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | ||| || ||||| || ||||| || || | Sbjct 438562 TGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGCGTTTTAA 438621 Query 34965 CAAAGATCTGCAT 34977 | ||||| ||||| Sbjct 438622 CGAAGATTTGCAT 438634 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || || || |||| | || || || ||||| || ||||| Sbjct 437987 CTCCTTCTGAATGTTGTAATCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 438046 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGG 34904 ||||| ||| || |||||| | || | ||||||||||| || | | || || |||||| Sbjct 438047 GATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC-TTGAATCTTGGTCTTGACGT 438105 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | |||| || | |||||| || | || || ||||| || || || ||||| | Sbjct 438106 TGTCGATCGTGTCTGACGACTCGACCTCGAGCGTAATCGTCTTGCCGGTCAGCGTCTTGA 438165 Query 34965 CAAAGATCTGCAT 34977 | || || ||||| Sbjct 438166 CGAAAATTTGCAT 438178 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || || |||| | || || || ||||| || |||||| Sbjct 679659 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 679718 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||| |||||||| | || | ||||||||||| | || || ||||| Sbjct 679719 ATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 679778 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || || |||||| || | || || ||||| || || || ||||| || Sbjct 679779 TCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACG 679838 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 679839 AAAATTTGCAT 679849 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || || |||| | || || || ||||| || |||||| Sbjct 679887 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 679946 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||| |||||||| | || | ||||||||||| | || || ||||| Sbjct 679947 ATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 680006 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || || |||||| || | || || ||||| || || || ||||| || Sbjct 680007 TCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGTCTTGACG 680066 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 680067 AAAATTTGCAT 680077 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| || || |||| | || || || ||||| || |||||| Sbjct 680115 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAG 680174 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||| |||||||| | || | ||||||||||| | || || |||||| Sbjct 680175 ATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 680234 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| || || |||||| || | || || ||||| || || | ||||| || Sbjct 680235 TCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCTGTCAAAGTCTTGACG 680294 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 680295 AAAATTTGCAT 680305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692280011089