Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq79 271 7e-68 seq70 134 1e-26 seq74 131 2e-25 seq85 127 2e-24 seq82 98.7 1e-15 >seq79 Length=1733205 Score = 271 bits (300), Expect = 7e-68 Identities = 836/1262 (66%), Gaps = 47/1262 (4%) Strand=Plus/Minus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| || ||| |||| Sbjct 51508 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT 51449 Query 148592 GAGCA-GCGCCGCCGACTCGCTT---TCGTACGGCATACGC--AGCCGCACAAACGCGTC 148645 |||| |||| | |||| | ||| ||||||| ||| || | || |||||||| Sbjct 51448 GAGCTTGCGC----GCCTCGGGTGAATCGAACGGCAT-CGCCAAGGC-CATGAACGCGTC 51395 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 ||| || || || || || | ||| ||||| ||||| | ||||||| |||| || Sbjct 51394 GGCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CT 51336 Query 148706 CTC-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTT 148763 | || || |||| |||| ||| ||||| || |||| ||| | || ||||| Sbjct 51335 CGATGACGGGGTAGTAGTTGACGTCAATGATGCGGTTCAAG-TTGAAAGCGACGACCTTG 51277 Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGG 148821 | | ||||| | || |||||| | | | |||| | |||| || | Sbjct 51276 ACGACCTCGTGCAGCTTCTTGAAGTCGTACACGCCGTTCTTGATGAAGCTCGG--CAAAG 51219 Query 148822 CGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGG 148881 |||| ||||| | ||||| ||||| ||| ||||| || |||||| | ||| || | Sbjct 51218 CGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAG 51159 Query 148882 CGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT-GCAC 148940 ||| || || | |||||| ||| | ||||||||| || || |||| ||| Sbjct 51158 TGCAAAGGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCA- 51100 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCG- 148999 ||||||||||| |||||| |||| ||| ||||| ||||| | ||| | ||| || Sbjct 51099 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGA----GAATCGC 51044 Query 149000 ATGC---AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGT 149056 || | || | |||||| | | || || | ||| ||||||| |||||| Sbjct 51043 ATACCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTC 50984 Query 149057 ATACA-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG- 149114 ||| | ||| ||| | ||||||||| |||| ||| |||||| ||| ||||| Sbjct 50983 GAACAAGACGCGA-AACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGG-CTTCGGCGGGG 50926 Query 149115 CACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAG 149174 || | ||| | ||| ||||| | || | || |||| ||| || |||||||| | |||| Sbjct 50925 CAGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAG 50866 Query 149175 AGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC---GCCCATGTTGCGGCGCAGG 149231 || || | | ||| || || || || | |||| | ||| ||| ||| ||| Sbjct 50865 AGAGCAAAGAAGAGATCACGAGC---GCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGG 50809 Query 149232 TTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTG 149291 | || | ||| | ||| |||||||||||||| | ||| | ||||| || || Sbjct 50808 TCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGA 50749 Query 149292 CGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGT 149348 ||| ||||| || |||||||||| |||| | ||||||| | || || | ||| || Sbjct 50748 CGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGG 50689 Query 149349 TCAATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTT 149407 | ||||| | | ||| ||| || || | ||| |||| ||| || | || Sbjct 50688 ACGATGCCGTTCG-AGTAGCCATTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTT 50630 Query 149408 GTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCG 149466 ||| | | | | ||||| || ||| || ||| |||||| |||||| ||| ||| | Sbjct 50629 GTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTGAGTG 50571 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | ||||||||| || || ||| |||||| || | ||| || || || | | | Sbjct 50570 TGTCGTAGATGCCTTCAATCGAATCGTCCTTCATCGTGACCAGGAAACAGGACGAGAGCT 50511 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGC 149586 |||| | |||| ||||| ||| | || || |||||| || || || || | Sbjct 50510 GCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGG 50451 Query 149587 TCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646 ||| | | |||||||| | ||||| || ||||| | || |||||||| | ||||| Sbjct 50450 ACATGAAGTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGA 50391 Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGC 149706 | ||||| ||||| |||||||| || || || || ||| | || ||||||||| Sbjct 50390 CACGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGG 50331 Query 149707 CGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGG 149766 | || || |||||| |||||||||| |||||| | || |||||| ||| | || || Sbjct 50330 AGCGCTCGAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGG 50271 Query 149767 CG 149768 || Sbjct 50270 CG 50269 >seq70 Length=1260279 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| | |||| ||| ||||||||||||||| || Sbjct 679653 GTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCGAGCTGCTTACC 679711 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||||||||| ||||| |||||||| |||||| ||| Sbjct 679712 AGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 679771 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 679772 GACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGT 679831 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 679832 CTTGACGAAAATTTGCAT 679849 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| | |||| ||| ||||||||||||||| || Sbjct 679881 GTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCGAGCTGCTTACC 679939 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | |||||||||||||| || ||||| |||||||| |||||| ||| Sbjct 679940 AGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 679999 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 680000 GACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGCGT 680059 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 680060 CTTGACGAAAATTTGCAT 680077 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| | |||| ||| ||||||||||||||| || Sbjct 680109 GTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCGAGCTGCTTACC 680167 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | |||||||||||||| || ||||| |||||||| |||||| ||| Sbjct 680168 AGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 680227 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| |||| ||| Sbjct 680228 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCTGTCAAAGT 680287 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 680288 CTTGACGAAAATTTGCAT 680305 Score = 123 bits (136), Expect = 2e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| ||||| || ||||||||| | |||| ||| ||||||||| Sbjct 437973 AAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAGAGCGTGCGACC-GTCCTCGAG 438031 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || | ||||| ||||| || || ||||| |||||||| || Sbjct 438032 CTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGAAT 438091 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||| | | ||| || |||| || | || ||||| Sbjct 438092 CTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTAATCGTCTTGCC 438151 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| || || |||||||| ||||| Sbjct 438152 GGTCAGCGTCTTGACGAAAATTTGCAT 438178 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || |||||||| | | |||| |||||||||||||||||| Sbjct 438438 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCA 438497 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||||||||||| || || ||||| |||||||| ||||| |||| Sbjct 438498 GCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTG 438557 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | | ||| || |||| ||||| || ||||| || || ||| Sbjct 438558 ACGTTGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGCGTT 438617 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 438618 TTAACGAAGATTTGCAT 438634 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | |||| ||| |||||| | ||||||||| Sbjct 438210 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACC-GTCCTCCAACTGCTTGCC 438268 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||| ||||| || || ||||| |||||||| ||||| ||| Sbjct 438269 CGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTT 438328 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 438329 GACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTGAGCGT 438388 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 438389 CTTGACAAAGATTTGCAT 438406 >seq74 Length=1285146 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| || | | ||| | | | |||||||| Sbjct 284706 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCA-TCCTCGAG 284648 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || ||||||||||| ||||||||||||||||| ||| Sbjct 284647 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTGGAT 284588 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| ||| ||||| Sbjct 284587 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCC 284528 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCA 133659 || || || || ||||| || |||| Sbjct 284527 CGTGAGGGTCTTGACGAAGATTTGCA 284502 >seq85 Length=620530 Score = 127 bits (140), Expect = 2e-24 Identities = 155/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| || | | ||| | | | |||||||| Sbjct 151179 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCA-TCCTCGAG 151121 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 151120 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 151061 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 151060 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 151001 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGG 133662 || ||||| || ||||| || ||| ||| Sbjct 151000 CGTAAGAGTCTTGACGAAGATTTGCCTGG 150972 >seq82 Length=918051 Score = 98.7 bits (108), Expect = 1e-15 Identities = 182/258 (71%), Gaps = 13/258 (5%) Strand=Plus/Plus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 77110 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 77168 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || |||||||| || || || |||||||||| ||| ||| | | ||| | ||| | Sbjct 77169 AATTCCTTCTCGATCTCGACGGCCTCCTTGATGATGAGCGCG---ACGGTGTCGGGG--T 77223 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 || |||| | || | | || || ||| |||| |||||||| ||||| |||||||| Sbjct 77224 GAGGTCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 77281 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 77282 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAG 77341 Query 120729 GTAGAATATGGCGGCAAA 120746 |||| |||| ||||| Sbjct 77342 CCAGAAGATGGAAGCAAA 77359 Score = 96.9 bits (106), Expect = 3e-15 Identities = 102/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 120364 ACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAAC 120423 || || ||||||||||||||||| |||||||| | |||||| | |||||||| ||||| Sbjct 76901 ACACGCTTCTCAAAAAAGTTTGTCTTGCCCTCGAGCGAAATCATATTCATAAAGTCGAAA 76960 Query 120424 GGGTTGCTC-GCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTAC 120482 ||||| ||| ||||| || || || | |||||| || | || |||||| || || Sbjct 76961 GGGTT-CTCGGCGTTCCAGACCTTGGGGTTGCCCAAGGCGACCAACAATCGGTCGGCGAC 77019 Query 120483 AAACTCAATGTA 120494 |||||| ||||| Sbjct 77020 AAACTCGATGTA 77031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420008398440