Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq70 89.7 1e-12
>seq70
Length=1260279
Score = 89.7 bits (98), Expect = 1e-12
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||||||||| || || |||||||| | || || || || ||||| ||||
Sbjct 438619 AAAACGCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCATCAGACACGATCGACAAC 438560
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||||| || || || ||| || ||| || || | ||||||
Sbjct 438559 GTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAGCAGCGATTGATCTTC 438500
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| | || || || | || | || ||||||||| ||||||| |||||
Sbjct 438499 GCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCGCGGATTACAACATCCAGAAGGAGTCG 438440
Query 206365 ACTCTTCAC 206373
|| || |||
Sbjct 438439 ACGCTGCAC 438431
Score = 84.2 bits (92), Expect = 5e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| ||| |||||||| || || |||||||| | || || || || |||
Sbjct 438403 CAAATCTTTGTCAAGACGCTCACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCAGAC 438344
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||||||||| || || || ||| || ||| ||
Sbjct 438343 ACGATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAACAG 438284
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || ||||||||||| || || | || | |||| |||||| |
Sbjct 438283 CGTCTCATCTTTGCGGGCAAGCAGTTGGAGGACGGTCGCACGCTCTCCGACTACAACATT 438224
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| || || |||
Sbjct 438223 CAGAAGGAGTCGACGCTGCAC 438203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181818816387651
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |