Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq79 147 3e-30 seq76 145 9e-30 seq74 122 1e-22 seq82 111 2e-19 >seq79 Length=1733205 Score = 147 bits (162), Expect = 3e-30 Identities = 524/808 (65%), Gaps = 21/808 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| || ||| |||| || || || | ||||| || || Sbjct 50368 CCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 50427 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 |||| || | ||| || |||||| | | |||| ||||| | || || ||||| Sbjct 50428 CTTGCAGTCGTACAACTTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTT 50487 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || || || || | || || ||||| || | | ||||| || Sbjct 50488 CAACGCCGGAACGCCTCACCCGCAGCTCTCGTCCTGTTTCCTGGTCACGATGAAGGACGA 50547 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 || || | || ||||| | || || | | ||| |||| ||||| ||| || || Sbjct 50548 TTCGATTGAAGGCATCTACGACACACTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 50607 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518 ||||| || || |||||| | | | || | ||| || ||| || || Sbjct 50608 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCCGGCACG 50665 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 ||||| | || | || || | || ||||| || || | ||| ||| |||||||| Sbjct 50666 AATGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 50725 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | |||| ||| ||||| ||| | |||| |||| || ||||| ||| Sbjct 50726 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGG 50782 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGC 104690 ||||| || || | |||||||| || | || ||||| || | ||||| | ||| Sbjct 50783 CACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGC 50842 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | | || |||||||||| |||||||||||||| |||||||||||| || | || |||| Sbjct 50843 GCT--CGTGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGG 50900 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 ||| | ||| | ||||| || || | | | || || || ||| ||| | | | Sbjct 50901 CCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTACG 50960 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 | || |||||| | | | | | || ||||| | || || || || | |||| Sbjct 50961 GCGAAGAGTTTCGCGTCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGA 51020 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | || || || | | | ||| | || |||||| | | || ||| || || | || Sbjct 51021 TCCCCGC-GCAAAAGCTTTGGTATGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCG 51079 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGA-GTAATCAAAAGAATTTGGGTGTGAT 104988 | |||||| ||||| |||| ||| || ||||| | || |||||||| | || ||| Sbjct 51080 TTCATGCTCTACAAGGACG-CTGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGAT 51138 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATC 105016 |||| || || || || || |||||| Sbjct 51139 CAAGTCGTCGAACCTTTGCACTGAAATC 51166 >seq76 Length=1206387 Score = 145 bits (160), Expect = 9e-30 Identities = 274/395 (69%), Gaps = 6/395 (2%) Strand=Plus/Plus Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291 ||| | ||||||||||| || || ||| ||| ||| || ||| || || || ||| | Sbjct 68855 CGCTTCTACCAAGCCTCGACCTCCGAGTTGTATGGCAAGGTCGTGGAGACCCCTCAATCC 68914 Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTG 7350 ||| ||| ||||||||||| || ||| ||||||||| | ||| | | ||| || Sbjct 68915 GAGACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGG-TTTCTG 68973 Query 7351 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7410 | ||||||| || ||||||||||| |||| ||| || ||| ||| ||| | ||||| Sbjct 68974 GATCGTCAAGAACTACCGCGAGTCGTACGATATGTACGCATGCAACGGTATCTTGTTCAA 69033 Query 7411 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT-TACCGAGGGTATC 7468 ||| || || ||| | || ||| ||| ||| ||||| | |||||| | ||| | | || Sbjct 69034 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATCTCGCGA-GCTGTC 69091 Query 7469 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGA 7528 | ||| | ||| || |||| | | | | | || ||||| | || | | Sbjct 69092 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGT 69151 Query 7529 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 7588 |||||||| |||||| ||||| || || | |||||| | ||||| || ||||| Sbjct 69152 GATTGGGGACACGCGCGCGACTACGTCGAGGGCATGTGGATGATGCTGCAGCAAGACACC 69211 Query 7589 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 7623 ||||||| | ||| | || |||||||||||||| Sbjct 69212 CCCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 69246 >seq74 Length=1285146 Score = 122 bits (134), Expect = 1e-22 Identities = 248/360 (69%), Gaps = 14/360 (4%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| || |||||||| ||||| || || |||| ||| ||| | |||||||||||| Sbjct 1090715 TTGATGATCAGACCCTTAATGTGCGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 1090774 Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279 || || || ||| | || || ||| | |||||||| || |||||||||||| Sbjct 1090775 TTGCCGTAACGGAGCGAGTCGACGTCAGTGTAGACTTTACCCTGCTGCAGACCCAAGATC 1090834 Query 169280 TTCTTGAGATCG-TTGAACTCTTGGTTTGATGT-GAGCTGTG---TGACAGAGGCATCGC 169334 | ||||| ||| ||||| ||| || | ||| ||| | | || | | || || | Sbjct 1090835 TGCTTGA--TCGCTTGAA-TCTCGGCAT--TGTCGAGGAGGGCCTTGCCCGCCGCTTCAC 1090889 Query 169335 GAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGG 169394 | || || |||| || || | ||||||||||| |||| || ||||| ||||| | Sbjct 1090890 GCACGTTGAGCAACTTTCCTCGCAAGGGGAAGACACCATAGTTGTCTCGACCGACGACAG 1090949 Query 169395 AGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATT 169454 ||||||| || ||||| | ||| || || || || ||||| | ||||||||| || | Sbjct 1090950 CCAGACCCGACACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACT 1091009 Query 169455 T--TCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAAT 169512 | || | | | |||||| || | ||||||||| || | ||| || ||| || || Sbjct 1091010 TGGACCCGTTCCT--CGTACCAGCGTGGTTCGCATCCTCGAGCTTGACAAGACCCGTGAT 1091067 >seq82 Length=918051 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291 ||| | ||||| ||||| || |||||| ||| || || ||| || || || || | Sbjct 275540 CGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCC 275481 Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351 ||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||| Sbjct 275480 GAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGG 275421 Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411 ||||||| || ||||||||||| |||| ||| |||||| ||| || ||||||||| Sbjct 275420 ATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATTCTCTTCAAC 275361 Query 7412 CATGAATCACC 7422 || || || || Sbjct 275360 CACGAGTCCCC 275350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259844910440