Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq70 100 9e-16
seq85 91.5 4e-13
seq74 91.5 4e-13
>seq70
Length=1260279
Score = 100 bits (110), Expect = 9e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || | || || || ||||| || || || || |
Sbjct 438400 TTTGCATACCACCACGGAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGT 438459
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| | | || || || || || || || || ||||| ||||| | || ||||| |
Sbjct 438460 AATCCGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGT 438519
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || || || ||||| || | || || || || |||| || ||||
Sbjct 438520 CTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGATG 438579
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || | ||||| || || || ||||| || || || |||||
Sbjct 438580 ACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGCGTTTTAACGAAGATTTGCAT 438634
>seq85
Length=620530
Score = 91.5 bits (100), Expect = 4e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
|||||||| || | | || || | || || || ||||| ||||| || || || ||
Sbjct 151203 ATACCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCC 151144
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
| | || || ||||| || || || || || |||||||| ||||||||||| || ||
Sbjct 151143 GCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGC 151084
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
|| || ||||| || || || || || | || || || || |||| || || | ||
Sbjct 151083 GGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCG 151024
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGC 140735
|| || || || | ||||| || || || || || || || || |||
Sbjct 151023 ACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 150976
>seq74
Length=1285146
Score = 91.5 bits (100), Expect = 4e-13
Identities = 145/207 (70%), Gaps = 1/207 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| || || || ||||| ||||| || || || || | | || || ||||| || |
Sbjct 284707 CAAG-TGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGA 284649
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || || |||||||| ||||||||||| || || || || ||||| || || || |
Sbjct 284648 GCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTGGA 284589
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || | || || || || |||| || || | || || || || || | ||||| |
Sbjct 284588 TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGC 284529
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCA 140736
| || || || || || || || ||||
Sbjct 284528 CCGTGAGGGTCTTGACGAAGATTTGCA 284502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251856740193
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |