Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq79 459 3e-124
seq82 91.5 2e-13
seq48 86.0 7e-12
>seq79
Length=1733205
Score = 459 bits (508), Expect = 3e-124
Identities = 788/1136 (69%), Gaps = 6/1136 (1%)
Strand=Plus/Plus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162
|| ||| || | ||||||| ||||| ||||||||||| || ||||| || ||| |||
Sbjct 50369 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 50428
Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222
|| | ||| || | ||| | || | |||||| ||||| ||||||| || |||
Sbjct 50429 TTGCAGTCGTACAACTTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTC 50488
Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282
|||||||| ||| |||||||| | ||| ||||||||| || | |||||||| ||
Sbjct 50489 AACGCCGGAACGCCTCACCCGCAGCTCTCGTCCTGTTTCCTGGTCACGATGAAGGACGAT 50548
Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342
||||| ||||||||||| || |||||| |||||||| |||||||||| ||||
Sbjct 50549 TCGATTGAAGGCATCTACGACACACTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 50608
Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402
|||||||| | | | || ||||| ||| || | ||| || |||||
Sbjct 50609 GGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTACATCGCCGGCACGAAT 50668
Query 19403 GGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461
|| || ||| ||| |||||||| |||||||| |||| ||||||||| || | |||||
Sbjct 50669 GGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGT 50727
Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521
| |||| || ||| ||| || || | ||||| |||||||||||||| ||||||||
Sbjct 50728 CGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGC 50787
Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581
|||||| | || ||||| || || ||| |||||| || | ||||| | ||| |||
Sbjct 50788 CGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCG 50847
Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641
|| |||||| || | |||||||| || || ||||||||| || ||| | ||
Sbjct 50848 TGATCTCTTCTTTGCTCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGG 50907
Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701
|| |||| ||| | ||||| |||| ||| ||||| | ||| ||||||||||| |
Sbjct 50908 CGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTACGGCGAAGA 50967
Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761
||| | |||| | || |||| | ||||||| ||||||| | ||| ||
Sbjct 50968 GTTTCGCGTCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGC 51027
Query 19762 CCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGT 19820
| | | ||| | ||| | ||| || ||||||||| ||||||| |||| ||||
Sbjct 51028 GCAAAAGCTTTGGTA-TGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGC 51086
Query 19821 GCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGT 19880
|||||||||||| || ||| || || || || |||||| | ||| ||||||||||||
Sbjct 51087 TCTACAAGGACGCTGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGT 51146
Query 19881 CCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATC 19940
| ||||| || ||||||||||| ||| || |||||||||| ||||| || ||
Sbjct 51147 CGAACCTTTGCACTGAAATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTTTGCAACT 51206
Query 19941 TGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGT 20000
|||| || | |||||| ||| ||||| | | | |||||| || ||
Sbjct 51207 TGGCCTCGATCGCTTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTCAAGAAGCTGC 51266
Query 20001 ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACC 20060
||||||| | ||||||| | || |||| ||| |||| || |||| ||||
Sbjct 51267 ACGAGGTCGTCAAGGTCGTCGCTTTCAACTTGAACCGCATCATTGACGTCAACTACTACC 51326
Query 20061 CGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGG 20120
| | | ||||| || || || | |||||||| || |||| ||||| || || |
Sbjct 51327 CCGTCATCGAGGCGCAGAACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAG 51386
Query 20121 GCCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAG 20179
| || ||||||| |||||| || ||| | | ||||| ||| |||||||| ||
Sbjct 51387 GTCTCGCCGACGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCACCCGAGGCGCGCAAG 51445
Query 20180 CTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235
||||||||| ||||||||| || | |||||||| || || | ||||||||
Sbjct 51446 CTCAACAAGCAGATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 51501
Score = 452 bits (500), Expect = 4e-122
Identities = 800/1153 (69%), Gaps = 25/1153 (2%)
Strand=Plus/Minus
Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834
||||||| | || |||||||| | | ||||||||| ||||||||||| |||||||
Sbjct 51492 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCC 51436
Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893
| || ||||||| | ||| || |||||| | ||||| || || || || ||
Sbjct 51435 TCGGGTGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCC 51377
Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950
||| |||| || |||||||| | |||| || | ||||||| | ||||| |
Sbjct 51376 GATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTG---CGCCTCGATGACGGGGTAGTA 51320
Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010
||| || |||| |||||||| ||| | ||||||| ||||||| || ||
Sbjct 51319 GTTGACGTCAATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAGCTT 51260
Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGAT----GCCAGG 79065
||| || | | | | ||| |||||| |||| || |||||| |||| |
Sbjct 51259 CTTGAAGTCGTACACGCCGTTCTT-GATGAAGCTCGG----CAAAGCGATCGAGGCCAAG 51205
Query 79066 TTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGAC 79125
||||| ||||| ||||||||| || |||||||||||| ||||| | || |||
Sbjct 51204 TTGCAAACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATTTCAGTGCAAAGGTTCGAC 51145
Query 79126 GACTTGATGGTGCCGATGTTCTTCTGGTT-GCTCTTCTCGTTACAGGCGTCCTTGTAGCA 79184
|||||||| ||||| | |||||| ||||| | | || | || ||| |||||||||||
Sbjct 51144 GACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCAG-CGTCCTTGTAGAG 51086
Query 79185 CATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGC 79244
|||| |||| | ||||| || ||||| | ||||| | | ||| | | | ||
Sbjct 51085 CATGAACGGGTTGCCGGTTTCGACCTGGGCTTCGAGAATCGCATACCAAAGCTTTTGCGC 51026
Query 79245 CCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGC 79304
||| ||||||| || |||| |||| || | |||| || || |
Sbjct 51025 GGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGACGCGAAACTC 50966
Query 79305 CTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTC 79364
|| || ||||| ||| | ||||| ||| ||| ||||| | ||| ||||||| |
Sbjct 50965 TTCGCCGTAGACTTCGTGGAGGCCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCC 50906
Query 79365 GTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCG 79424
| | ||| || |||||||||||| || || ||||| || || |||||| || ||
Sbjct 50905 GGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGAGCAAAGAAGAGATCACG 50846
Query 79425 GCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGC 79484
|| | ||||| | ||| |||||| || || || || || || | || ||||||
Sbjct 50845 AGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGC 50786
Query 79485 GTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGAC 79544
|||||||||||| || ||||| ||||| | || |||||| ||| || |||| |||
Sbjct 50785 GTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGAC 50726
Query 79545 GTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTT 79604
||| || || ||||||||| | || ||||||||||| |||||||||| | | ||| ||
Sbjct 50725 GTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCATT 50666
Query 79605 CGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCC 79664
||| ||| ||| | ||| |||| || ||||| | | | ||||| || ||
Sbjct 50665 CGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACC 50606
Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724
|| |||||||||| |||||||| |||||| || ||||||||||| || ||||| ||
Sbjct 50605 GGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGTGTGTCGTAGATGCCTTCAATCGAATC 50546
Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784
||||||||| | ||||||||| ||| ||| | ||| |||| ||| |||||||||||
Sbjct 50545 GTCCTTCATCGTGACCAGGAAACAGGACGAGAGCTGCGGGTGAGGCGTTCCGGCGTTGAA 50486
Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844
||| ||||||| ||||| |||||| | | | ||| | | ||||| || | |||
Sbjct 50485 GAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAAGTTGTACGACTGCAAGAC 50426
Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCG 79903
|||| || ||||| |||||||||||||| ||||| ||||||| | || ||| |||||
Sbjct 50425 GCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCG 50366
Query 79904 TCTCGCCGACATT 79916
| ||| |||| ||
Sbjct 50365 T-TCGGCGACCTT 50354
Score = 149 bits (164), Expect = 7e-31
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242
|||||| || ||||| ||||||||||||||||| || || |||||| ||||| | |||
Sbjct 52308 GGCGCGCGTGCGCAAGTAGTACATGCCCGTCTTCAGTCCTCGCTTCCAACCGTAGAAGTG 52249
Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302
||| || |||| |||| ||||| || || | |||||||||||| || |||||
Sbjct 52248 CATCGACGTGAGCTGCGCCATTGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 52189
Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362
||| ||| | ||||| |||||||| | || ||||| | | |||||||| | ||||||
Sbjct 52188 GTCAATGAAGGCACCTCGGTCGGCGGACAGATCGATAATGGTCTTTTGCGAGAGCTCCCA 52129
Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389
|| |||| ||| |||||||| || ||
Sbjct 52128 GACGGTCTTGTAGATGGCCTTGAGATC 52102
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677
||||||| ||| |||| |||||| ||||| || | || |||| ||| ||||| || |
Sbjct 52105 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACCATTATCGATCTGTCC 52164
Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737
||||| || || |||| ||| |||||||| || |||||||| || | || || |||
Sbjct 52165 GCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCCG 52224
Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797
| ||||| |||| | || ||||| | ||||| ||| | || || |||||||||
Sbjct 52225 ACAATGGCGCAGCTCACGTCGATGCACTTCTACGGTTGGAAGCGAGGACTGAAGACGGGC 52284
Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821
|||||||| |||| || || |||
Sbjct 52285 ATGTACTACTTGCGCACGCGCGCC 52308
>seq82
Length=918051
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083
|||||||| | | || ||||||||||| ||||||||| | ||||| || ||| |||
Sbjct 77365 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 77306
Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118
||||||||||| || || || ||||||||||||||
Sbjct 77305 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 77271
>seq48
Length=317269
Score = 86.0 bits (94), Expect = 7e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079
||| ||||| ||| | || || ||||||||||| || ||||||||||| |||||
Sbjct 262419 CTCAGGCTCCTTCGCCTCCATATTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTC 262360
Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119
||||||||||||||| || ||||| ||||| || || |||
Sbjct 262359 TTTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 262320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548523901790640
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