Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12-
23] 131 sequences; 28,837,994 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq79 340 2e-88
seq74 143 3e-29
>seq79
Length=1733205
Score = 340 bits (376), Expect = 2e-88
Identities = 536/765 (70%), Gaps = 2/765 (0%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| |||||| | || ||||||||| ||||| | ||| ||| || |||||
Sbjct 50382 TCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACA 50441
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|||| ||| | | ||||| || |||||| |||| || || |||||||| || |||
Sbjct 50442 ACTTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 50501
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|||||| ||| | ||| ||| |||||||| |||||||||| || ||||| || ||||
Sbjct 50502 CTCACCCGCAGCTCTCGTCCTGTTTCCTGGTCACGATGAAGGACGATTCGATTGAAGGCA 50561
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| || |||||| ||| || | |||||||||| | |||||||||||| |
Sbjct 50562 TCTACGACACACTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 50621
Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
| | ||| |||| |||| |||| | ||| || ||||| ||| | | | |
Sbjct 50622 GCATCCACAACATCCGCGCGACCGGCTCCTACATCGCCGGCACGAATGGCTACTCGAACG 50681
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| ||||| || |||||||| |||| ||||||||| || || |||||| |||| |||||
Sbjct 50682 GCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCA 50741
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | ||||| ||||||||||||||||||||||||||| | | ||||
Sbjct 50742 ACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCCGACGTCTTCGAGT 50801
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672
| || || || || ||| || || | || || | ||| ||||| || || |
Sbjct 50802 TCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGTGATCTCTTCTTTG 50861
Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732
|||| |||||||| || ||||||||| | || ||| | || || ||| |||
Sbjct 50862 CTCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGGCGACTGGCCCCTCT 50921
Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGT 53792
| ||||| ||| |||||||||||| | |||||||| || |||||| || |||
Sbjct 50922 TCTGCCCCGCCGAAGCCCCCGGCCTCCACGAAGTCTACGGCGAAGAGTTTCGCGTCTTGT 50981
Query 53793 ATCG-GACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGG 53851
||| || |||| | |||||||| |||||||| | || |||| || | |||
Sbjct 50982 -TCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGG 51040
Query 53852 GATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCG 53911
|||| || ||| | |||||| || || || | |||| |||| ||||||||| |
Sbjct 51041 TATGCGATTCTCGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCT 51100
Query 53912 GTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956
| ||| | || ||||| |||||| | ||| ||||| |||
Sbjct 51101 GCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCG 51145
Score = 104 bits (114), Expect = 3e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785
|||||||| || ||| ||| || |||||| | | || |||| | || || ||
Sbjct 52104 TCTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACCATTATCGATCTGTC 52163
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
|| || || ||||| | ||| |||||||| || || || |||||| | || || ||
Sbjct 52164 CGCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCC 52223
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
|| |||| || | | ||||||||||| ||||| |||||| ||||| ||||||||
Sbjct 52224 GACAATGGCGCAGCTCACGTCGATGCACTTCTACGGTTGGAAGCGAGGACTGAAGACGGG 52283
Query 55906 TATGTACTATCTGCGGACCCGCGCC 55930
|||||||| |||| || ||||||
Sbjct 52284 CATGTACTACTTGCGCACGCGCGCC 52308
>seq74
Length=1285146
Score = 143 bits (158), Expect = 3e-29
Identities = 308/455 (68%), Gaps = 8/455 (2%)
Strand=Plus/Plus
Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933
|||| || ||||| || || | ||| || |||| | ||| || | || ||| |||
Sbjct 1089834 ATCCCGTTCCGATACCATCCGAACCATTAACCAAAGCCATGGGGATGATGGGGATGTACC 1089893
Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993
| |||||| | | |||||| || || | | ||||| || ||| | ||||| |
Sbjct 1089894 AAGACGGCTCGATGTTTTGACCATCGTCGTTGAGGTATTCCAGCACGTTGTCATCAGCGG 1089953
Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACG--CGTGAAGATGTATCGGGAGCTG-- 152049
||| || | | ||| || || ||| | | ||| |||||||||||| | |||| |
Sbjct 1089954 GATGAAAGACGCTTCGCGTGAT-GGA-TGATACGTTCGTGAAGATGTAAC--GAGCCGAA 1090009
Query 152050 GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTG 152109
||||| || || |||||| ||| ||||| || || || || || ||||| | ||||
Sbjct 1090010 GCCGCGTCTTTACCACCTTGCAGACGCGTACCGAATTGACCGTTCGGGTCGAGAATGTTG 1090069
Query 152110 AGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCT 152169
|||||||||| || ||||| | || ||||| | || ||||| |||| ||||
Sbjct 1090070 AGGTTGTTGGACCCGACGAACTGTTGCGCCAAGCCAATGATGGTGCCTTGCAAACTCAAA 1090129
Query 152170 TCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATG 152229
|||||||| || ||||||| ||||| |||| ||| || ||| || | ||||| ||
Sbjct 1090130 TCACCGTGATGGTACGCCGAGTGCTCAGCGACGTAACCGCCCAGTTGTCCGACCTTGATC 1090189
Query 152230 TCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAA 152289
||| ||||| || ||||| || || | | |||||||| || ||||| ||
Sbjct 1090190 TCCTGCGTCAACTTGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGTTTGAAT 1090249
Query 152290 CCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
|| || | || |||||||||||| | ||||
Sbjct 1090250 CCATCAATGACAGAGGGAATCGAACGCACGTTGTC 1090284
Score = 114 bits (126), Expect = 1e-20
Identities = 205/297 (69%), Gaps = 2/297 (1%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| |||||||||| || || || || ||||| |||||||||||||||||
Sbjct 1089989 GTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGCGTACCGAATTGA 1090048
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|| |||| || | | ||| |||||||||| || || || | ||| |||||| |
Sbjct 1090049 CCGTTCGGGTCGAGAATGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAAGCCAATG 1090108
Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484
|| || ||||| | ||| ||||| || || ||||||| ||||| || ||||| ||
Sbjct 1090109 ATGGTGCCTTGCAAACTCAAATCACCGTGATGGTACGCCGAGTGCTCAGCGACGTAACCG 1090168
Query 117485 GCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACC 117544
|||| || | ||||| || || ||||| || ||||| ||| | | | |||
Sbjct 1090169 CCCAGTTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAAGCAACCGAACAAGACC 1090228
Query 117545 TTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGG-ATCGAACGCTTGATGTC 117600
||||| |||| || || | ||||| || ||||| ||||||||| | ||||
Sbjct 1090229 TTGCGTTGACCCGGTTTGAATCCATCAATGAC-AGAGGGAATCGAACGCACGTTGTC 1090284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215103933800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |