Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq85 168 2e-36 seq74 159 8e-34 seq70 143 6e-29 >seq85 Length=620530 Score = 168 bits (186), Expect = 2e-36 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| ||||||||||| || ||||| || || | ||||| Sbjct 151185 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 151126 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||||| ||||| || || | ||||||||||| Sbjct 151125 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 151066 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 151065 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 151006 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| |||||||| || || Sbjct 151005 TTGCCCGTAAGAGTCTTGACGAA 150983 >seq74 Length=1285146 Score = 159 bits (176), Expect = 8e-34 Identities = 162/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| ||||||||||| || ||||| || || | ||||| Sbjct 284712 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 284653 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||||| ||||| || || | ||||||||||| Sbjct 284652 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCT 284593 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||| ||| Sbjct 284592 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 284533 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 || |||||||| ||||| || || | |||| Sbjct 284532 TTGCCCGTGAGGGTCTTGACGAAGATTTGCA 284502 >seq70 Length=1260279 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| |||||||| || || | || || Sbjct 438423 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCC 438482 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||| || |||| || |||||||| Sbjct 438483 TCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCT 438542 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 438543 TGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTC 438602 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || || || | ||||| Sbjct 438603 TTGCCAGTGAGCGTTTTAACGAAGATTTGCAT 438634 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || || ||||| || || | || || | || || Sbjct 438195 AGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCC 438254 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| || ||||| || || |||||||| || |||| || |||||||| Sbjct 438255 TCCAACTGCTTGCCCGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 438314 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 438315 TGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTGATCGTC 438374 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | ||||| Sbjct 438375 TTGCCAGTGAGCGTCTTGACAAAGATTTGCAT 438406 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||||| || ||||| || || ||||| ||||| | || || Sbjct 437957 ACGAAGACGGAGCACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAGAGCGT 438016 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| |||||||| | || |||||||| || |||| || Sbjct 438017 GCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCC 438076 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || ||||| || ||||| ||||| ||||| || || |||||||| Sbjct 438077 CTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAG 438136 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| || || || ||||| || || | ||||| Sbjct 438137 CGTAATCGTCTTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 438178 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || || || || || ||||| || || | || || | || || Sbjct 679638 AGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCC 679697 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| ||||||| || ||||||||| Sbjct 679698 TCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 679757 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| ||| || |||||||| ||||||||| Sbjct 679758 TGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTC 679817 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 679818 TTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 679849 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || || || || || ||||| || || | || || | || || Sbjct 680094 AGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCC 680153 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| || |||| || ||||||||| Sbjct 680154 TCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 680213 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| ||| || |||||||| ||||||||| Sbjct 680214 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 680273 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| || || | ||||| Sbjct 680274 TTGCCTGTCAAAGTCTTGACGAAAATTTGCAT 680305 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || || || || || ||||| || || | || || | || || Sbjct 679866 AGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGACCGTCC 679925 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || ||||| || |||| || ||||||||| Sbjct 679926 TCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 679985 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| ||| || |||||||| ||||||||| Sbjct 679986 TGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATCGTC 680045 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 680046 TTGCCGGTCAGCGTCTTGACGAAAATTTGCAT 680077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150054435815