Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq82 167 2e-36 >seq82 Length=918051 Score = 167 bits (184), Expect = 2e-36 Identities = 200/269 (74%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 27457 TGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG---TACTCTGCTCCGAAA 27513 ||||| |||||| |||| || || | ||| || |||| |||||||| || ||| Sbjct 229854 TGATCGACCCCCTCCCCCTGATAATC-ATCCT--TGGCCGTCCTATACTCTGCGCCAAAA 229910 Query 27514 TGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 27573 |||||||| ||||||||||| |||||||||| || ||||||||||| ||| | || || Sbjct 229911 TGCCTCCACTGGAACCCGTAAACCGGTCCCAAATCCCCCTCTTCCCTATGCGCCAACCCA 229970 Query 27574 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 27633 |||||||||||| | ||| || || || | ||||| ||||| |||||||| ||||| Sbjct 229971 ACCTTGTCCAAAAATTGTCTCGATCCATTCCCATCCCAAATCTTGACCCCCTTGTCGGAC 230030 Query 27634 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 27693 | | ||| |||| || || || | |||||||| || || ||||| | || | | | Sbjct 230031 AACAATTTCGAGTCGGTCGATCCGCGAACGAACCAAAGGAGTTCCTCGATGATGCCTCGC 230090 Query 27694 CAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||||||| |||||||||| | ||||| Sbjct 230091 GTAAAGACCTTCTTGGTCGTCAAAAGGGG 230119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506610058661