Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900014965.1_202016-12- 23] 131 sequences; 28,837,994 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq74 134 1e-26 seq85 131 1e-25 seq70 131 1e-25 >seq74 Length=1285146 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || |||||||||||||||||| || ||||| ||| | || || Sbjct 284710 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTC 284651 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||||||||| | ||| ||||| || | || | |||||||| || Sbjct 284650 GAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTG 284591 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || ||||||| || || ||||| | || || ||||| Sbjct 284590 GATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTT 284531 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 |||||||||||||| ||||||||||||| Sbjct 284530 GCCCGTGAGGGTCTTGACGAAGATTTGCA 284502 >seq85 Length=620530 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||||||||||||| || ||||| ||| | || || Sbjct 151182 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCG 151123 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | ||| ||||| |||| || | |||||||| || Sbjct 151122 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 151063 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||||| || || ||||| | || |||||||| Sbjct 151062 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 151003 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || ||||| |||||||||||| || Sbjct 151002 CCCGTAAGAGTCTTGACGAAGATTTGCCTG 150973 >seq70 Length=1260279 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| ||||| |||||| |||||||||||||| ||||| ||| |||| || Sbjct 438425 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCGTCCTC 438484 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || |||||||| |||||||| |||| || | || ||||| || Sbjct 438485 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTG 438544 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || ||||| | || || ||||| | || |||||||| Sbjct 438545 AATCTTGGTCTTGACGTTGTCGATCGTGTCTGATGACTCGACCTCGAGGGTGATCGTCTT 438604 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || || |||||||||||||| Sbjct 438605 GCCAGTGAGCGTTTTAACGAAGATTTGCAT 438634 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||||| |||||| || ||||||||||||| ||| ||| |||| || Sbjct 437969 CACCAAATGAAGCGTCGACTCCTTCTGAATGTTGTAATCGGAGAGCGTGCGACCGTCCTC 438028 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || |||||||| ||||| || |||| || | || ||||| || Sbjct 438029 GAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTG 438088 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || ||||| | || || ||||| | |||||||||||| Sbjct 438089 AATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCGAGCGTAATCGTCTT 438148 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| ||||| |||||||| Sbjct 438149 GCCGGTCAGCGTCTTGACGAAAATTTGCAT 438178 Score = 125 bits (138), Expect = 5e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || | | ||||| ||| ||||| |||||| || |||||||| Sbjct 438173 TTGCATACCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTA 438232 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| ||| ||| |||| |||| |||||| || |||||||| | |||||| || || Sbjct 438233 GTCGGAGAGCGTGCGACCGTCCTCCAACTGCTTGCCCGCAAAGATGAGACGCTGTTGGTC 438292 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | || ||||| || ||||| ||| | | | || ||||| | || Sbjct 438293 TGGGGGAATGCCCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATCGTGTCTGACGA 438352 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | ||| |||||||| || ||||| ||||| || ||||||||||| Sbjct 438353 CTCGACCTCGAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACAAAGATTTGCAT 438406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989825252827