Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq109 176 5e-39
seq55 141 1e-28
seq101 136 4e-27
seq63 136 4e-27
>seq109
Length=1214152
Score = 176 bits (194), Expect = 5e-39
Identities = 173/223 (78%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 116647 GTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACAC 116706
|||||| ||||||||||| || |||||||||| ||| ||| ||||| ||||||||||||
Sbjct 63347 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 63288
Query 116707 GAGCGACTGGGAGCGCTTGAACGA---CAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763
| ||||||||| | | | | | |||||||| | |||||| |||||| || ||
Sbjct 63287 GCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCTCGCACGTCCTCGC 63228
Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823
||| |||||||| ||||||||||||||||||||| |||||||||| ||| | ||
Sbjct 63227 CTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCGGTTCTCCGGTGA 63168
Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866
||| ||| ||||| || || ||||||||||| || || |||
Sbjct 63167 GGTCCAGTCCGCCGAAGCTCGATGCTTCTACGGTTTCCAAATC 63125
Score = 93.3 bits (102), Expect = 4e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145
||||| |||| || ||||||||||| |||||| | |||||||| |||| ||| ||||
Sbjct 62624 TTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGCTTGATGCCCGGATTGACCTTCTCCAAC 62565
Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189
|||||||| || | |||||||| || || ||||||||||||
Sbjct 62564 GAGCTCATTTCGCGTGACGAGGGCCTCCACACCGACTTTGCCTG 62521
>seq55
Length=1512399
Score = 141 bits (156), Expect = 1e-28
Identities = 172/234 (74%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| ||| |||||||||| | ||| ||||||| || ||| ||| ||| ||| | |||||
Sbjct 263958 ATCTGGGCCATGTACAAACAAGCCCAGGCGTCCTTTTGGTCCGCCGAAGAGATCGACCTC 263899
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752
||| ||| ||||||| | | | | ||| || |||| ||| | ||||||
Sbjct 263898 GGCAACGACCTCCACGACTGGCACCACAAGCTCAACAACGACGAACGCTACTTCATCGCC 263839
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|| || || |||||||||||||| |||||| |||| || |||||| |||||||| |
Sbjct 263838 CATGTACTCGCCTTTTTCGCCGCTTCGGACGGCGTCGTGAATGAGAATTTGGTCGAGAGG 263779
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866
||| | ||||||||| | || |||||| ||||||| || ||||||||||||
Sbjct 263778 TTCTCGAGTGAGGTGCAGTTCGCAGAGGCGAGGTGCTTTTATGGCTTTCAGATC 263725
Score = 141 bits (156), Expect = 1e-28
Identities = 169/227 (74%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750
||||||| ||||| || || || |||||||| ||||||||| |||| ||||| || |||
Sbjct 1270627 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1270568
Query 40751 ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
||| | | |||| |||||| || || | ||||| || || || ||| | ||||||
Sbjct 1270567 ACACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 1270509
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||||| ||| ||||| ||||| || || | || || ||| |||||||||
Sbjct 1270508 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAAC 1270449
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||| |||||| | || || || | ||| | ||| || | || ||
Sbjct 1270448 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGTGG 1270402
Score = 107 bits (118), Expect = 2e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 117085 TTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAA 117144
||||||| |||| || |||||||||||||| ||||||||||||||||| |||| |||
Sbjct 263265 TTTCGCCTCCATCTTCTGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAA 263206
Query 117145 CGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA 117204
||||||||||||| | ||||| ||||| ||| || || ||| | |||||| ||
Sbjct 263205 CGAGCTCATCTCCCGCGACGAAGGTCTCCATACTGAATTCGCCGTCCTTTTGTTCAGTCA 263146
Query 117205 TTTG 117208
||||
Sbjct 263145 TTTG 263142
>seq101
Length=1647458
Score = 136 bits (150), Expect = 4e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || || || ||||| ||||| |||| ||||| | |
Sbjct 462805 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 462864
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| || |||| ||||| |||||||||||| | |||||
Sbjct 462865 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 462923
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||||||
Sbjct 462924 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 462983
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||| ||||
Sbjct 462984 CATCCAGAAGGAGTCGACGTTGCA 463007
Score = 136 bits (150), Expect = 4e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || || || ||||| ||||| |||| ||||| | |
Sbjct 463489 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 463548
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| || |||| ||||| |||||||||||| | |||||
Sbjct 463549 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 463607
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||||||
Sbjct 463608 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463667
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||| ||||
Sbjct 463668 CATCCAGAAGGAGTCGACGTTGCA 463691
Score = 136 bits (150), Expect = 4e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || |||||||| ||||| |||| || || | |
Sbjct 463717 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 463776
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| || |||| ||||| |||||||||||| | |||||
Sbjct 463777 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 463835
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||| ||
Sbjct 463836 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTATAA 463895
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||||| ||
Sbjct 463896 CATCCAGAAGGAGTCGACGCTCCA 463919
Score = 136 bits (150), Expect = 4e-27
Identities = 154/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| || ||||| |||| ||||| | |
Sbjct 689571 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 689630
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| || || | ||||| ||||||||||| | |||||
Sbjct 689631 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCA 689689
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | ||||| ||| |||||||||
Sbjct 689690 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 689749
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||| ||||
Sbjct 689750 CATCCAGAAGGAGTCGACGTTGCA 689773
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || |||||||| ||||| |||| || || | |
Sbjct 462577 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 462636
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| || || | ||||| |||||||||||| | |||||
Sbjct 462637 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 462695
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||||||
Sbjct 462696 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 462755
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||| ||||
Sbjct 462756 CATCCAGAAGGAGTCGACGTTGCA 462779
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || |||||||| ||||| |||| || || | |
Sbjct 463033 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 463092
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| || || | ||||| |||||||||||| | |||||
Sbjct 463093 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 463151
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||||||
Sbjct 463152 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463211
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||| ||||
Sbjct 463212 CATCCAGAAGGAGTCGACGTTGCA 463235
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || |||||||| ||||| |||| || || | |
Sbjct 463261 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 463320
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| || || | ||||| |||||||||||| | |||||
Sbjct 463321 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 463379
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||||||
Sbjct 463380 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463439
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||| ||||
Sbjct 463440 CATCCAGAAGGAGTCGACGTTGCA 463463
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || |||||||| ||||| |||| ||||| | |
Sbjct 689799 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 689858
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| || || | ||||| |||||||| || | |||||
Sbjct 689859 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCA 689917
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||||||
Sbjct 689918 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 689977
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | ||| ||||
Sbjct 689978 CATCCAGAAGGAGTCGACGTTGCA 690001
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || || |||||||| ||||| |||| ||||| | |
Sbjct 690027 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 690086
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| || |||| ||||| ||||||||||| | |||||
Sbjct 690087 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGACCA 690145
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||||||
Sbjct 690146 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 690205
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| | ||| ||||
Sbjct 690206 TATCCAGAAGGAGTCGACGTTGCA 690229
>seq63
Length=908128
Score = 136 bits (150), Expect = 4e-27
Identities = 153/202 (76%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751
|||||| ||||| || || || |||||||| || |||||| |||| ||||| | ||||
Sbjct 127552 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 127611
Query 40752 CAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810
|| | | |||| |||||| || || | ||||| || |||||||| | |||||||
Sbjct 127612 CACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 127670
Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870
|||| ||||||| ||| ||||| ||||| || || | ||||| ||| ||||||||||
Sbjct 127671 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACA 127730
Query 40871 TCCAGAAGGAGGCCACGCTGCA 40892
|||| |||||| | || || ||
Sbjct 127731 TCCAAAAGGAGTCGACCCTCCA 127752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218253284720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |