Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq109 176 5e-39 seq55 141 1e-28 seq101 136 4e-27 seq63 136 4e-27 >seq109 Length=1214152 Score = 176 bits (194), Expect = 5e-39 Identities = 173/223 (78%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 116647 GTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACAC 116706 |||||| ||||||||||| || |||||||||| ||| ||| ||||| |||||||||||| Sbjct 63347 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 63288 Query 116707 GAGCGACTGGGAGCGCTTGAACGA---CAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763 | ||||||||| | | | | | |||||||| | |||||| |||||| || || Sbjct 63287 GCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCTCGCACGTCCTCGC 63228 Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823 ||| |||||||| ||||||||||||||||||||| |||||||||| ||| | || Sbjct 63227 CTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCGGTTCTCCGGTGA 63168 Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| ||| ||||| || || ||||||||||| || || ||| Sbjct 63167 GGTCCAGTCCGCCGAAGCTCGATGCTTCTACGGTTTCCAAATC 63125 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 ||||| |||| || ||||||||||| |||||| | |||||||| |||| ||| |||| Sbjct 62624 TTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGCTTGATGCCCGGATTGACCTTCTCCAAC 62565 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 |||||||| || | |||||||| || || |||||||||||| Sbjct 62564 GAGCTCATTTCGCGTGACGAGGGCCTCCACACCGACTTTGCCTG 62521 >seq55 Length=1512399 Score = 141 bits (156), Expect = 1e-28 Identities = 172/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| |||||||||| | ||| ||||||| || ||| ||| ||| ||| | ||||| Sbjct 263958 ATCTGGGCCATGTACAAACAAGCCCAGGCGTCCTTTTGGTCCGCCGAAGAGATCGACCTC 263899 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 ||| ||| ||||||| | | | | ||| || |||| ||| | |||||| Sbjct 263898 GGCAACGACCTCCACGACTGGCACCACAAGCTCAACAACGACGAACGCTACTTCATCGCC 263839 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || |||||||||||||| |||||| |||| || |||||| |||||||| | Sbjct 263838 CATGTACTCGCCTTTTTCGCCGCTTCGGACGGCGTCGTGAATGAGAATTTGGTCGAGAGG 263779 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| | ||||||||| | || |||||| ||||||| || |||||||||||| Sbjct 263778 TTCTCGAGTGAGGTGCAGTTCGCAGAGGCGAGGTGCTTTTATGGCTTTCAGATC 263725 Score = 141 bits (156), Expect = 1e-28 Identities = 169/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 ||||||| ||||| || || || |||||||| ||||||||| |||| ||||| || ||| Sbjct 1270627 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1270568 Query 40751 ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | |||| |||||| || || | ||||| || || || ||| | |||||| Sbjct 1270567 ACACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 1270509 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 1270508 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAAC 1270449 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||| | || || || | ||| | ||| || | || || Sbjct 1270448 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGTGG 1270402 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 117085 TTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAA 117144 ||||||| |||| || |||||||||||||| ||||||||||||||||| |||| ||| Sbjct 263265 TTTCGCCTCCATCTTCTGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAA 263206 Query 117145 CGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA 117204 ||||||||||||| | ||||| ||||| ||| || || ||| | |||||| || Sbjct 263205 CGAGCTCATCTCCCGCGACGAAGGTCTCCATACTGAATTCGCCGTCCTTTTGTTCAGTCA 263146 Query 117205 TTTG 117208 |||| Sbjct 263145 TTTG 263142 >seq101 Length=1647458 Score = 136 bits (150), Expect = 4e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || ||||| ||||| |||| ||||| | | Sbjct 462805 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 462864 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||||||| | ||||| Sbjct 462865 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 462923 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 462924 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 462983 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 462984 CATCCAGAAGGAGTCGACGTTGCA 463007 Score = 136 bits (150), Expect = 4e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || ||||| ||||| |||| ||||| | | Sbjct 463489 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 463548 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||||||| | ||||| Sbjct 463549 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 463607 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 463608 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463667 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 463668 CATCCAGAAGGAGTCGACGTTGCA 463691 Score = 136 bits (150), Expect = 4e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| || || | | Sbjct 463717 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 463776 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||||||| | ||||| Sbjct 463777 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 463835 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||| || Sbjct 463836 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTATAA 463895 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||||| || Sbjct 463896 CATCCAGAAGGAGTCGACGCTCCA 463919 Score = 136 bits (150), Expect = 4e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| |||| ||||| | | Sbjct 689571 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 689630 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| ||||||||||| | ||||| Sbjct 689631 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCA 689689 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 689690 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 689749 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 689750 CATCCAGAAGGAGTCGACGTTGCA 689773 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| || || | | Sbjct 462577 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 462636 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||||||| | ||||| Sbjct 462637 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 462695 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 462696 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 462755 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 462756 CATCCAGAAGGAGTCGACGTTGCA 462779 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| || || | | Sbjct 463033 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 463092 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||||||| | ||||| Sbjct 463093 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 463151 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 463152 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463211 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 463212 CATCCAGAAGGAGTCGACGTTGCA 463235 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| || || | | Sbjct 463261 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 463320 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||||||| | ||||| Sbjct 463321 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 463379 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 463380 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463439 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 463440 CATCCAGAAGGAGTCGACGTTGCA 463463 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| ||||| | | Sbjct 689799 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 689858 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| |||||||| || | ||||| Sbjct 689859 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCA 689917 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 689918 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 689977 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 689978 CATCCAGAAGGAGTCGACGTTGCA 690001 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || |||||||| ||||| |||| ||||| | | Sbjct 690027 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 690086 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| ||||||||||| | ||||| Sbjct 690087 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGACCA 690145 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 690146 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 690205 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | ||| |||| Sbjct 690206 TATCCAGAAGGAGTCGACGTTGCA 690229 >seq63 Length=908128 Score = 136 bits (150), Expect = 4e-27 Identities = 153/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 |||||| ||||| || || || |||||||| || |||||| |||| ||||| | |||| Sbjct 127552 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 127611 Query 40752 CAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 || | | |||| |||||| || || | ||||| || |||||||| | ||||||| Sbjct 127612 CACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 127670 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 |||| ||||||| ||| ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 127671 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACA 127730 Query 40871 TCCAGAAGGAGGCCACGCTGCA 40892 |||| |||||| | || || || Sbjct 127731 TCCAAAAGGAGTCGACCCTCCA 127752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218253284720