Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq63 91.5 1e-13 seq109 87.8 2e-12 seq55 82.4 8e-11 >seq63 Length=908128 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | || | || ||||| | || ||||| ||||| ||||| || || Sbjct 127776 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 127717 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || |||||||| || || || |||| ||||||||||| || || || Sbjct 127716 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 127657 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| ||||| ||| || || | | || | ||||||| | ||| ||| Sbjct 127656 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 127597 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGC 139762 || | ||| | ||||||||| || | || || ||||| |||||| Sbjct 127596 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 127552 >seq109 Length=1214152 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 52921 TACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAAT 52980 ||||||||||||||||| ||| || ||||| | | || | || || || ||| Sbjct 62292 TACATCGAGTTTGTTGCCGACCGATTGTTGGTCGCTTTGGGCAACCCCAAGGTCTGGAAT 62233 Query 52981 GCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTC 53040 || ||||||||| || ||||||| || ||||||||||||||||||||||| ||| Sbjct 62232 GCTGAGAACCCCTTTGACTTCATGAACATGATCTCGCTCGAGGGCAAAACAAACTTCTTC 62173 Query 53041 GAGAGACGTGT 53051 |||| ||||| Sbjct 62172 GAGAAGCGTGT 62162 >seq55 Length=1512399 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || ||||| ||||| ||||| || || | || | || ||| Sbjct 1270420 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCCTCG 1270479 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || || |||| ||||||||||| || || || || ||||| ||||| | Sbjct 1270480 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGG 1270539 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||||| || ||| ||||| | ||| | |||||| Sbjct 1270540 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTG 1270599 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCA 139763 || || | || || ||||| ||||||| Sbjct 1270600 CCCGTAAGGGTCTTGACGAAGATTTGCA 1270627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063088482400