Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq109 100 4e-16 >seq109 Length=1214152 Score = 100 bits (110), Expect = 4e-16 Identities = 171/242 (71%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || |||| | |||||| ||||| |||| ||||| ||||| | ||||||| | || || Sbjct 63358 ATCTGGGCACAGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTG 63299 Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 ||||||||| || |||| ||||| || | | | || ||||| | || || || Sbjct 63298 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 63240 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197 |||| | | |||||||| |||| ||||| || ||||||||||| || || | || Sbjct 63239 GCACGTCCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCG 63180 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTG-TCG-TGCTTTTACGGATTCCAAATCATG 125255 ||||| ||| | ||| ||| | | ||| ||||| ||||| |||||||||||| Sbjct 63179 GTTCTCCGGTGAG--GTCCAGTCCGCCGAAGCTCGATGCTTCTACGGTTTCCAAATCATG 63122 Query 125256 AT 125257 || Sbjct 63121 AT 63120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057838303720