Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq55 168 1e-37 seq69 158 2e-34 >seq55 Length=1512399 Score = 168 bits (186), Expect = 1e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 1265768 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1265827 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| || |||| || | ||| | |||||||||||| Sbjct 1265828 GTCAAGCGTATCTCCGGCCTGATCTACGAGGAGACCCGAGGTGTGCTCAAGATCTTCCTC 1265887 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| |||||||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 1265888 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 1265947 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || | || || ||||| | | | || ||||| || Sbjct 1265948 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1266003 Score = 165 bits (182), Expect = 1e-36 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 805832 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 805773 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| || |||| || | ||| | |||||||||||| Sbjct 805772 GTCAAGCGTATCTCCGGCCTGATCTACGAGGAGACCCGAGGTGTGCTCAAGATCTTCCTC 805713 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| |||||||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 805712 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 805653 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | || ||||||| || | || || ||||| | | | || ||||| || Sbjct 805652 TCGCTCGACGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 805597 Score = 165 bits (182), Expect = 1e-36 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || |||||||| || Sbjct 1343835 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGGGGT 1343776 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| || |||| || | ||| | |||||||||||| Sbjct 1343775 GTCAAGCGTATCTCCGGCCTGATCTACGAGGAGACCCGAGGTGTGCTCAAGATCTTCCTC 1343716 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| |||||||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 1343715 GAGAACGTTATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 1343656 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || | || || ||||| | | | || ||||| || Sbjct 1343655 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1343600 >seq69 Length=2353272 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 530005 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 529946 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 529945 GTCAAGCGTATCTCCGGCCTGATCTACGAAGAGACGCGAGGTGTCCTTAAGATCTTCCTC 529886 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 529885 GAGAACGTGATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACCGTCACC 529826 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || ||||||| || Sbjct 529825 TCGCTCGACGTCGTCTACGC 529806 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 573039 CGCGACAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 573098 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 573099 GTCAAGCGTATCTCCGGCCTGATCTACGAAGAGACGCGAGGTGTCCTTAAGATCTTCCTC 573158 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 573159 GAGAACGTGATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACCGTCACC 573218 Query 16637 TCCATGGATATCGTCTATGC 16656 || | || ||||||| || Sbjct 573219 TCGCTCGACGTCGTCTACGC 573238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075065596871