Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq91 111 3e-19
>seq91
Length=119584
Score = 111 bits (122), Expect = 3e-19
Identities = 267/401 (67%), Gaps = 5/401 (1%)
Strand=Plus/Minus
Query 193770 GAGAAAG-ATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGT--GGTGTTCTA 193826
|| |||| | || ||| |||| || || || ||| ||| ||||| || ||| || |
Sbjct 72178 GACAAAGCACGTCCGCTTCTACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGA 72119
Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAG 193886
| || || | ||| ||||| || || || | || || || ||||| || || || |||
Sbjct 72118 G--ACCCCTCAATCCGAAACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAG 72061
Query 193887 TTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCT 193946
||||| | | |||||| ||||||| || || |||||||| | | |||| | |
Sbjct 72060 TTGTACGCCTTCTGGATCGTCAAGAACTACCGCGAGTCATACGACATGTACGCGTGCAAT 72001
Query 193947 GGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATT 194006
||||| |||||||| ||||| || ||| | | ||| || || || || | ||||||
Sbjct 72000 GGTATCCTCTTCAACCACGAGTCCCCACGTCGTGGTCGCACCTTCGTCACGAGGAAGATT 71941
Query 194007 ACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTT 194066
| | || | | | ||||||| | || |||| | || || || || || |
Sbjct 71940 TCGCGAGCTGTCGCCGAGATCTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATG 71881
Query 194067 AATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTG 194126
| || ||| | ||||||||||| || || ||||| || | |||||| | ||| |
Sbjct 71880 GAGGCCAAGCGTGATTGGGGACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTT 71821
Query 194127 CAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGA 194167
|| ||||| ||||| || | ||| | || || |||||
Sbjct 71820 CAGCAGGACACCCCCGACGACTTTGTTCTCGCGACGGGTGA 71780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807553716117320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |