Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq101 96.9 3e-15 >seq101 Length=1647458 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || || || | ||| || || || || || ||||| ||| Sbjct 690254 ACCACCACGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGC 690195 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||||| ||| || || || || |||||| |||| | ||||| ||||| ||||| Sbjct 690194 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGG 690135 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || ||||| |||||| || | | || | ||||| | || ||||| Sbjct 690134 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 690075 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||||||||||||||| || || ||||| || ||||| Sbjct 690074 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 690027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||| ||| Sbjct 690028 ATACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCG 689969 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || || || || |||||| |||| | ||||| ||||| ||| Sbjct 689968 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGA 689909 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | ||||| | || ||| Sbjct 689908 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCG 689849 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||||||||||||| || || || || || ||||| Sbjct 689848 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 689799 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | | || || || | ||| || || || || ||||| || ||| Sbjct 463943 CCGCCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCG 463884 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||| ||| || || || || |||||| |||| | ||||| ||||| || || Sbjct 463883 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGG 463824 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| |||||| || | | || | ||||| | || || || Sbjct 463823 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCAACC 463764 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||||||||||||||| || || || || || ||||| Sbjct 463763 TCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463717 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||| ||| Sbjct 462806 ATACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCG 462747 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || || || || |||||| |||| | ||||| ||||| || Sbjct 462746 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGG 462687 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | || || Sbjct 462686 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCA 462627 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||||||||||||| || || || || || ||||| Sbjct 462626 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 462577 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||| ||| Sbjct 463262 ATACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCG 463203 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || || || || |||||| |||| | ||||| ||||| || Sbjct 463202 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGG 463143 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | || || Sbjct 463142 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCA 463083 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||||||||||||| || || || || || ||||| Sbjct 463082 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463033 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||| ||| Sbjct 463490 ATACCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCG 463431 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || || || || |||||| |||| | ||||| ||||| || Sbjct 463430 GCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGG 463371 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | || || Sbjct 463370 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCA 463311 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||||||||||||| || || || || || ||||| Sbjct 463310 ACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133647302964