Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq109 365 8e-96 >seq109 Length=1214152 Score = 365 bits (404), Expect = 8e-96 Identities = 873/1298 (67%), Gaps = 38/1298 (3%) Strand=Plus/Minus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT-GCC 244449 |||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| | | Sbjct 12726 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCAGGC 12667 Query 244450 GCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCC 244509 | | ||| || || ||| |||||| | ||||| || || ||||| |||||||| Sbjct 12666 GAATC-GAACGGCATCGCCAAGGCCATGAACGCATCGGCGAGACCTTGCACTCCGATGCC 12608 Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 |||||| | ||| || |||||| || ||| |||||||| ||||| |||| Sbjct 12607 GATGGGGCGGTGGCGGAAGTTGGAATTTTGCGCCTCGATGACGGGGTAGTAGTTGACGTC 12548 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 ||| | ||| | ||| | | | |||||| ||| |||| | ||||| Sbjct 12547 GATGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTCGTGCAGCTTTTTGAAGTC 12488 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 |||| || | | || || ||| ||| ||| || | ||| || Sbjct 12487 GTACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGAAGC---- 12446 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 || ||||||||| || ||| || | | ||||| || ||||||||||| ||||| Sbjct 12445 CAAGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCGGTGCACAGGTT 12386 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 | ||||| ||||| |||| || || || ||||| ||| |||||||||||| Sbjct 12385 CGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCGGCGTCCTTGTA 12326 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCC 244868 |||||||||||| |||||||||| |||||| |||||| ||| || ||| || | Sbjct 12325 GAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGC-GTACCAAAGCTTTT 12267 Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 || || ||| | || ||||| ||||| | ||||| | || Sbjct 12266 GCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCGAACAGGACGCGGA 12207 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988 |||| ||| |||| |||| ||||||||| | || ||||| | ||| ||||| Sbjct 12206 ACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAGAGGGGCCACT 12147 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 ||||| || ||| ||| | || |||||| || |||||||||||||| || |||||| | Sbjct 12146 CGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCAAAGAAGAGAT 12087 Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAAGACG 245107 | | | | || ||| ||| ||| ||||| | || |||| || || |||||| Sbjct 12086 CACGAGCGCGGACTTCTTCCTTGCC-GTGATTCTTGCGAAGGTCCAGGAACTCGAAGACG 12028 Query 245108 TCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGG 245167 ||| ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || ||| Sbjct 12027 TCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGG 11968 Query 245168 TCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227 || || | | || |||| ||| |||||| | || || ||||| || |||| | Sbjct 11967 TCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGAGTAG 11908 Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGT 245287 ||||| ||||| |||||||| ||| | | | || |||| |||| | || | Sbjct 11907 CCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTTAAACCGATA 11848 Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 || |||||| |||||||||||| ||||| |||||| ||||| ||||| || || Sbjct 11847 CCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCAATC 11788 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 ||| |||||| ||| || ||||| || || ||||| || | ||| | | | Sbjct 11787 GAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGGGTACCGGCA 11728 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTG 245466 ||||| || || || ||||||||| ||||||| |||| || | || ||| | ||| Sbjct 11727 TTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGC-GCTCGGACATGAGGTTGTAGGACTG 11669 Query 245467 GAGCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGC 245524 | ||| ||| ||||||| || |||||||| | |||| | |||||| ||||| Sbjct 11668 CA--AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGC 11611 Query 245525 TG-GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTC 245581 || || ||| ||| | | || | ||| | |||| ||||||||||||||| ||| Sbjct 11610 TGCGGACGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGTGTC 11554 Query 245582 TTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTC 245641 ||||| ||||| || |||||| || ||| || || ||||||| || ||| | Sbjct 11553 TTGAAGCCAAAATAGTTGTAGCCGAAATCGCGGTCGTAGATGACGGCGCTGTTGAGGCGG 11494 Query 245642 TCGGCG-TGCTTCTGACTGACCTCGTAAAACTTTTGCG 245678 |||||| || ||| |||||||||| || ||||| Sbjct 11493 TCGGCGTTGGCCATGA-TGACCTCGTACGTCTCTTGCG 11457 Score = 140 bits (154), Expect = 6e-28 Identities = 189/260 (73%), Gaps = 5/260 (2%) Strand=Plus/Minus Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803 ||| | ||||| |||||||||||||||||| || | | |||||||||| | |||||| Sbjct 62630 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGCTTGATGCCCGGATTGACCTTC 62571 Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 || ||||| ||||| | |||||||| || || | ||||||||||||||| ||||| Sbjct 62570 TCCAACGAGCTCATTTCGCGTGACGAGGGCCTCCACACCGACTTTGCCTGCCTCTTGTTC 62511 Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922 || ||||||| || ||| || | || || | |||||||| |||||| Sbjct 62510 TC---CCACCTCGAGC-GAAGACCGCACCCCGACACCGTTGCGCTCATCATCAAGGAGGC 62455 Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982 ||| |||||||||||||||||| | || || | || ||| || |||||||||| Sbjct 62454 CGTCGAGATCGAGAAGGAGTTCTTGACCAAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 62395 Query 42983 CCACGACCTCATGTGCAAGT 43002 | | | ||||||||| ||| Sbjct 62394 CGCCAAGCTCATGTGCCAGT 62375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337464776720