Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq90 93.3 4e-14
>seq90
Length=1545510
Score = 93.3 bits (102), Expect = 4e-14
Identities = 168/243 (69%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 20411 GCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCC 20470
|| |||||||| |||| || |||||| || || ||| || || | || || |
Sbjct 1223246 GCGGGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTGGGGTTCTCCTTGATGCTCTTG 1223305
Query 20471 ACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGC-GTCCACGTA 20529
|||| | | ||| || || | ||||| ||| ||| ||| | | || |||| ||
Sbjct 1223306 ACAACCTGCATCAACTGATCGACCCCCTCGCCCTGATAATCATCCTTGGCCGTCCTA-TA 1223364
Query 20530 CGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT 20589
| | |||||||| ||||||||||| || || ||||| || |||||||||||||| ||
Sbjct 1223365 CTCTGCCCCAAAATGCCTCCACTGAAACCCATAAACCGGCCCCAAATCCCCCTCTTCCCT 1223424
Query 20590 GTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGAC 20649
||| ||| || | ||| ||||||| | |||||||| ||||| ||||||||
Sbjct 1223425 ATGCCCCAACCCAACCTTCTCCAAGAACTCCTTCGAGCCATTCCCATCCCAAATCTTGAC 1223484
Query 20650 TCC 20652
||
Sbjct 1223485 CCC 1223487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441371988977480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |