Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq101 149 7e-31 >seq101 Length=1647458 Score = 149 bits (164), Expect = 7e-31 Identities = 179/238 (75%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 ||| || |||| || | | ||| | |||||| ||||| || |||||| || |||||| Sbjct 690262 ATTCATTGACCACCACGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTG 690203 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 || || || || || || | || || |||||||| |||||||| || | |||||||||| Sbjct 690202 TAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGG 690143 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGC 42150 || | || | || |||||||||| ||| | || | |||| ||| | | | |||||| Sbjct 690142 TCTGGAGGGATGCCCTCCTTGTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCG 690085 Query 42151 TCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || |||| |||||| |||||||| || || ||||| |||||||||||||| Sbjct 690084 ACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 690027 Score = 136 bits (150), Expect = 4e-27 Identities = 164/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| ||||| || |||||| || || ||||| || || || || || | Sbjct 463020 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 462961 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | |||||||||||| | || | || |||||| Sbjct 462960 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 462901 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170 |||| ||| | || | |||| ||| | | | |||||| ||| || || |||| |||| Sbjct 462900 GTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTG 462843 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || || || ||||| |||||||||||||| Sbjct 462842 ATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 462805 Score = 136 bits (150), Expect = 4e-27 Identities = 164/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| ||||| || |||||| || || ||||| || || || || || | Sbjct 463704 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463645 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | |||||||||||| | || | || |||||| Sbjct 463644 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463585 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170 |||| ||| | || | |||| ||| | | | |||||| ||| || || |||| |||| Sbjct 463584 GTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTG 463527 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || || || ||||| |||||||||||||| Sbjct 463526 ATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 463489 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| ||||| || |||||| || || ||||| || || || || || | Sbjct 690014 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 689955 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | |||||||||||| | || | || |||||| Sbjct 689954 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTT 689895 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || |||| ||| | | | |||||| ||| || || |||| ||||| Sbjct 689894 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 689836 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||||||| || || ||||| || ||||||||||| Sbjct 689835 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 689799 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| ||||| || |||||| || || ||||| || || || || || | Sbjct 462792 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 462733 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | |||||||||||| | || | || |||||| Sbjct 462732 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 462673 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || || | ||| | | | |||||| ||| || || |||| ||||| Sbjct 462672 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 462614 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||||||| || || ||||| || ||||||||||| Sbjct 462613 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 462577 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| ||||| || |||||| || || ||||| || || || || || | Sbjct 463248 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463189 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | |||||||||||| | || | || |||||| Sbjct 463188 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463129 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || || | ||| | | | |||||| ||| || || |||| ||||| Sbjct 463128 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 463070 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||||||| || || ||||| || ||||||||||| Sbjct 463069 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463033 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| ||||| || |||||| || || ||||| || || || || || | Sbjct 463476 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463417 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | |||||||||||| | || | || |||||| Sbjct 463416 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463357 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || || | ||| | | | |||||| ||| || || |||| ||||| Sbjct 463356 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 463298 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||||||| || || ||||| || ||||||||||| Sbjct 463297 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463261 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| ||||| || |||||| || || ||||| || || || || || | Sbjct 689786 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 689727 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | |||||||||||| | || | || |||||| Sbjct 689726 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTT 689667 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| || |||| ||| | | | |||||| ||| || || |||| ||||| Sbjct 689666 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 689608 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || ||||| || || ||||| || ||||||||||| Sbjct 689607 TCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 689571 Score = 122 bits (134), Expect = 9e-23 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | || |||||| || || || || || || || || || | Sbjct 463932 ACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCC 463873 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| || | |||||||||||| | || | || |||||| Sbjct 463872 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463813 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170 |||| ||| | || | |||| ||| | | | |||||| ||| || || |||| |||| Sbjct 463812 GTCC-TGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTG 463755 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||||||| || || ||||| || ||||||||||| Sbjct 463754 ATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211801846480