Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq109 251 7e-62
>seq109
Length=1214152
Score = 251 bits (278), Expect = 7e-62
Identities = 734/1124 (65%), Gaps = 25/1124 (2%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | || |||| |||||| || || ||| || ||| | || || || |||| |
Sbjct 11534 TACAACTATTTTGGCTTCAAGACACTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 11593
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| |||| || ||||| || |||| ||||| |||||| |||| || ||||| ||||||
Sbjct 11594 GTCGCCGAACGTCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 11653
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATGGCC 93894
|| | || |||| | | | || |||| || | | || ||| |||
Sbjct 11654 ATCGAGCGCGTCTTGCAGTCCTACAACCTCATGTCCGA---GCGCTACTTCACCCACGCC 11710
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| ||||| || ||||| || || ||||| || ||| | || ||||| ||| || |
Sbjct 11711 TCGCCGACGCTCTTCAATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTC 11770
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
|||| |||| |||||| || || || | ||||| |||||| || ||| ||||
Sbjct 11771 ACGATGAAGGACGACTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATC 11830
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| || ||| || || ||||| | || ||||| || | || || | || ||||||
Sbjct 11831 TCCAAGACCGCCGGTGGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGGCTCCTAC 11890
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
||| ||| || || ||| ||| || ||| ||||||| ||||| || |||| |||||||
Sbjct 11891 ATCGCCGGCACGAACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAAC 11950
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| ||||||||||| ||||| ||||| | | | || | |||||| |||| |||
Sbjct 11951 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 12010
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||||| ||||| | ||| | ||||| || ||||| |||||||| ||
Sbjct 12011 GAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAA 12070
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
| | || | || ||||||| || |||||| | || || || || ||| | ||
Sbjct 12071 GAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGT 12130
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|||||| | || ||| || || || ||| || ||||| || |||
Sbjct 12131 GTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAA 12190
Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
|| | || | ||| | | | ||| | |||||| | |||| ||||
Sbjct 12191 GTCTACGGCGAAGAGTTCCG-CGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAA 12249
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
|||| || || ||||| ||| | |||| | || | ||||| ||||| ||
Sbjct 12250 GAAGACCATCCCCGCGCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGG 12309
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
| |||| ||| | | ||||||| | | ||| ||||| ||||| || |||||||
Sbjct 12310 CAACCCCTTCATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGG 12369
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
|||||| ||||| |||||||||||||| ||||||| | |||| ||||||
Sbjct 12370 CACGATCAAATCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCTCCCGACGAGTG 12429
Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672
||||| || ||| ||| || ||| || | | ||| | | ||| || |||
Sbjct 12430 CGCTGTCTGCAACTTGGCTTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGT 12483
Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACC 94732
||| |||| | ||| | ||| | || || ||| | | || |||
Sbjct 12484 GTACGACTTC-AAAAAGCTGCACGAGGTCGTCAAGGTCG---------TTGCGTTTAACT 12533
Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792
||||| | | |||||| |||| |||||||||| |||||| | || || ||| |
Sbjct 12534 TGAACCGCATCATCGACGTCAACTACTACCCCGTCATCGAGGCGCAAAATTCCAACTTCC 12593
Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836
|| || |||||||||||||| || || ||| |||| || |||
Sbjct 12594 GCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGATGCG 12637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722290946120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |