Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq109 251 7e-62 >seq109 Length=1214152 Score = 251 bits (278), Expect = 7e-62 Identities = 734/1124 (65%), Gaps = 25/1124 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | || |||| |||||| || || ||| || ||| | || || || |||| | Sbjct 11534 TACAACTATTTTGGCTTCAAGACACTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 11593 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| |||| || ||||| |||||| Sbjct 11594 GTCGCCGAACGTCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 11653 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATGGCC 93894 || | || |||| | | | || |||| || | | || ||| ||| Sbjct 11654 ATCGAGCGCGTCTTGCAGTCCTACAACCTCATGTCCGA---GCGCTACTTCACCCACGCC 11710 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || ||||| || || ||||| || ||| | || ||||| ||| || | Sbjct 11711 TCGCCGACGCTCTTCAATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTC 11770 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| |||||| || || || | ||||| |||||| || ||| |||| Sbjct 11771 ACGATGAAGGACGACTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATC 11830 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 11831 TCCAAGACCGCCGGTGGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGGCTCCTAC 11890 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || || ||| ||| || ||| ||||||| ||||| || |||| ||||||| Sbjct 11891 ATCGCCGGCACGAACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAAC 11950 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 11951 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 12010 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || ||||| |||||||| || Sbjct 12011 GAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAA 12070 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| || |||||| | || || || || ||| | || Sbjct 12071 GAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGT 12130 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || ||| || || || ||| || ||||| || ||| Sbjct 12131 GTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAA 12190 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || | || | ||| | | | ||| | |||||| | |||| |||| Sbjct 12191 GTCTACGGCGAAGAGTTCCG-CGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAA 12249 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || ||||| ||| | |||| | || | ||||| ||||| || Sbjct 12250 GAAGACCATCCCCGCGCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGG 12309 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | ||||||| | | ||| ||||| ||||| || ||||||| Sbjct 12310 CAACCCCTTCATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGG 12369 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||||| ||||| |||||||||||||| ||||||| | |||| |||||| Sbjct 12370 CACGATCAAATCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCTCCCGACGAGTG 12429 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672 ||||| || ||| ||| || ||| || | | ||| | | ||| || ||| Sbjct 12430 CGCTGTCTGCAACTTGGCTTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGT 12483 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACC 94732 ||| |||| | ||| | ||| | || || ||| | | || ||| Sbjct 12484 GTACGACTTC-AAAAAGCTGCACGAGGTCGTCAAGGTCG---------TTGCGTTTAACT 12533 Query 94733 TGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGA 94792 ||||| | | |||||| |||| |||||||||| |||||| | || || ||| | Sbjct 12534 TGAACCGCATCATCGACGTCAACTACTACCCCGTCATCGAGGCGCAAAATTCCAACTTCC 12593 Query 94793 AGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| |||| || ||| Sbjct 12594 GCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGATGCG 12637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722290946120