Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq109 104 2e-17
seq101 100 3e-16
seq63 96.9 3e-15
seq55 87.8 2e-12
>seq109
Length=1214152
Score = 104 bits (114), Expect = 2e-17
Identities = 484/752 (64%), Gaps = 21/752 (3%)
Strand=Plus/Minus
Query 153717 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA---AC 153773
||||| ||| |||||||| | || |||||||||||| || | |||| ||| ||
Sbjct 12336 GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTAC 12277
Query 153774 CTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCG 153833
| | || | ||||| | | || | ||| ||||| | ||||| ||||
Sbjct 12276 CAAAGC---TTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCG 12220
Query 153834 TACAGT-CGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACA 153892
|||| ||| || ||| ||||||||| ||| ||||||||| || || ||
Sbjct 12219 AACAGGACGCGGAA-CTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCA 12161
Query 153893 CATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAG 153952
| || | |||| || |||| | ||| || |||||||||||| || | ||||||
Sbjct 12160 GAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAG 12101
Query 153953 CGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTC--AGATTG 154010
||| | | ||| || || || | || ||| ||| || | | || | || |
Sbjct 12100 CGCAAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCG-TGATTC-TTGCGAAGGTCC 12043
Query 154011 AGCA-CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACG 154069
|| | | | | ||| |||||||||||| || || | ||||| || | ||| || |||
Sbjct 12042 AGGAACTCGA-AGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACG 11984
Query 154070 CTTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTC 154126
||| || || || ||||||| |||| | | |||||| ||||||||| |||||| |
Sbjct 11983 CTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGAC 11924
Query 154127 CAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATG 154186
| ||| | | | |||||| || ||| | | |||| ||||| | | ||
Sbjct 11923 GATGCCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTG 11864
Query 154187 CACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCC 154245
| | | | || || || ||| || ||| || ||| ||||| ||| |||||
Sbjct 11863 GATGCTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTG-AGCGTGT 11805
Query 154246 TGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCG 154305
||||||||| || || ||||| | || |||||| ||||| | | ||||
Sbjct 11804 CGTAGATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCG 11745
Query 154306 GAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAAC-AGTTTTTGGCTC 154364
| | || || || ||||| || || ||||| || || || | || |
Sbjct 11744 GGTGAGGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGA-C 11686
Query 154365 ATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACG 154424
|| | | ||| | | | | || ||||| || | ||||| ||||||| |||||
Sbjct 11685 ATGAGGTTGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACA 11626
Query 154425 CGCATGAGCATGTGCTGCGGACGTTCGGCGAC 154456
||||||||||||||||||||||||||||||||
Sbjct 11625 CGCATGAGCATGTGCTGCGGACGTTCGGCGAC 11594
Score = 82.4 bits (90), Expect = 8e-11
Identities = 99/132 (75%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 52698 TACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAA 52756
|||||||||||||| || || || ||||||| | | ||||| || ||| || ||
Sbjct 62292 TACATCGAGTTTGTTGCCGACCGATTGTTGGT-CGCTTTGGGCAACCCCAAGGTCTGGAA 62234
Query 52757 CGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTT 52816
||| || || ||||| || ||||||| || ||||| |||||||| || ||||| ||
Sbjct 62233 TGCTGAGAACCCCTTTGACTTCATGAACATGATCTCGCTCGAGGGCAAAACAAACTTCTT 62174
Query 52817 CGAGAAGCGAGT 52828
||||||||| ||
Sbjct 62173 CGAGAAGCGTGT 62162
>seq101
Length=1647458
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||||| |||||||| || || || |
Sbjct 462998 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 462939
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| | ||||| ||||| || || || || || ||||| ||| | || | || |
Sbjct 462938 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC-CTGAATCTTGGCCTTGAC 462880
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | |||||| ||||||| ||| | ||||||||| ||||| || |
Sbjct 462879 GTTG-TCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTCT 462821
Query 138599 TTACAAAAATCTGCAT 138614
| ||||| || |||||
Sbjct 462820 TGACAAAGATTTGCAT 462805
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||||| |||||||| || || || |
Sbjct 463682 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 463623
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| | ||||| ||||| || || || || || ||||| ||| | || | || |
Sbjct 463622 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC-CTGAATCTTGGCCTTGAC 463564
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | |||||| ||||||| ||| | ||||||||| ||||| || |
Sbjct 463563 GTTG-TCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTCT 463505
Query 138599 TTACAAAAATCTGCAT 138614
| ||||| || |||||
Sbjct 463504 TGACAAAGATTTGCAT 463489
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||||| |||||||| || || || |
Sbjct 689992 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 689933
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | ||||| ||||| ||||| || || || ||||| ||| || || |
Sbjct 689932 AAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 689873
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || ||
Sbjct 689872 TTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 689813
Query 138601 ACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 689812 ACGAAGATTTGCAT 689799
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||||| |||||||| || || || |
Sbjct 462770 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 462711
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | ||||| ||||| || || || || || ||||| ||| || || |
Sbjct 462710 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 462651
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || ||
Sbjct 462650 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 462591
Query 138601 ACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 462590 ACGAAGATTTGCAT 462577
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||||| |||||||| || || || |
Sbjct 463226 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 463167
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | ||||| ||||| || || || || || ||||| ||| || || |
Sbjct 463166 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 463107
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || ||
Sbjct 463106 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 463047
Query 138601 ACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 463046 ACGAAGATTTGCAT 463033
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||||| |||||||| || || || |
Sbjct 463454 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 463395
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | ||||| ||||| || || || || || ||||| ||| || || |
Sbjct 463394 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 463335
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || ||
Sbjct 463334 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 463275
Query 138601 ACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 463274 ACGAAGATTTGCAT 463261
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | || || |||||||| || || || |
Sbjct 689764 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCG 689705
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| | ||||| ||||| ||||| || || || ||||| ||| || || |
Sbjct 689704 AAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 689645
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | |||||| ||||||| ||| | ||| || |||||||| || ||
Sbjct 689644 TTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTG 689585
Query 138601 ACAAAAATCTGCAT 138614
|| || || |||||
Sbjct 689584 ACGAAGATTTGCAT 689571
>seq63
Length=908128
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | || | || || || | | | ||||||||||| |||||||||||
Sbjct 127776 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 127717
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || |||||||| || || |||| |||| ||||| || ||||| || ||
Sbjct 127716 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 127657
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| ||| || || | | || | ||||||| |||||| |||
Sbjct 127656 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 127597
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||| || | ||| || || || ||||| || || || || ||| ||
Sbjct 127596 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 127549
>seq55
Length=1512399
Score = 87.8 bits (96), Expect = 2e-12
Identities = 155/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| || | || || || | | | ||||||||||| |||||||||||
Sbjct 1270402 CCACCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1270461
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| |||||||| || || |||| |||| ||||| || ||||| || ||
Sbjct 1270462 AGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGA 1270521
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| ||| || || | | || | ||||||| ||||| |||
Sbjct 1270522 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACC 1270581
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613
|||| || | || || || || || || || || || || ||||
Sbjct 1270582 TCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATTTGCA 1270627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261488117840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |