Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq109 104 2e-17 seq101 100 3e-16 seq63 96.9 3e-15 seq55 87.8 2e-12 >seq109 Length=1214152 Score = 104 bits (114), Expect = 2e-17 Identities = 484/752 (64%), Gaps = 21/752 (3%) Strand=Plus/Minus Query 153717 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAA---AC 153773 ||||| ||| |||||||| | || |||||||||||| || | |||| ||| || Sbjct 12336 GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTAC 12277 Query 153774 CTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCG 153833 | | || | ||||| | | || | ||| ||||| | ||||| |||| Sbjct 12276 CAAAGC---TTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCG 12220 Query 153834 TACAGT-CGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACA 153892 |||| ||| || ||| ||||||||| ||| ||||||||| || || || Sbjct 12219 AACAGGACGCGGAA-CTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCA 12161 Query 153893 CATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAG 153952 | || | |||| || |||| | ||| || |||||||||||| || | |||||| Sbjct 12160 GAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAG 12101 Query 153953 CGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTC--AGATTG 154010 ||| | | ||| || || || | || ||| ||| || | | || | || | Sbjct 12100 CGCAAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCG-TGATTC-TTGCGAAGGTCC 12043 Query 154011 AGCA-CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACG 154069 || | | | | ||| |||||||||||| || || | ||||| || | ||| || ||| Sbjct 12042 AGGAACTCGA-AGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACG 11984 Query 154070 CTTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTC 154126 ||| || || || ||||||| |||| | | |||||| ||||||||| |||||| | Sbjct 11983 CTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGAC 11924 Query 154127 CAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATG 154186 | ||| | | | |||||| || ||| | | |||| ||||| | | || Sbjct 11923 GATGCCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTG 11864 Query 154187 CACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCC 154245 | | | | || || || ||| || ||| || ||| ||||| ||| ||||| Sbjct 11863 GATGCTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTG-AGCGTGT 11805 Query 154246 TGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCG 154305 ||||||||| || || ||||| | || |||||| ||||| | | |||| Sbjct 11804 CGTAGATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCG 11745 Query 154306 GAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAAC-AGTTTTTGGCTC 154364 | | || || || ||||| || || ||||| || || || | || | Sbjct 11744 GGTGAGGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGA-C 11686 Query 154365 ATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACG 154424 || | | ||| | | | | || ||||| || | ||||| ||||||| ||||| Sbjct 11685 ATGAGGTTGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACA 11626 Query 154425 CGCATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||||||||||||||||||||||| Sbjct 11625 CGCATGAGCATGTGCTGCGGACGTTCGGCGAC 11594 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 52698 TACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAA 52756 |||||||||||||| || || || ||||||| | | ||||| || ||| || || Sbjct 62292 TACATCGAGTTTGTTGCCGACCGATTGTTGGT-CGCTTTGGGCAACCCCAAGGTCTGGAA 62234 Query 52757 CGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTT 52816 ||| || || ||||| || ||||||| || ||||| |||||||| || ||||| || Sbjct 62233 TGCTGAGAACCCCTTTGACTTCATGAACATGATCTCGCTCGAGGGCAAAACAAACTTCTT 62174 Query 52817 CGAGAAGCGAGT 52828 ||||||||| || Sbjct 62173 CGAGAAGCGTGT 62162 >seq101 Length=1647458 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 462998 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 462939 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | ||||| ||||| || || || || || ||||| ||| | || | || | Sbjct 462938 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC-CTGAATCTTGGCCTTGAC 462880 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||| ||||||| ||| | ||||||||| ||||| || | Sbjct 462879 GTTG-TCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTCT 462821 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| || ||||| Sbjct 462820 TGACAAAGATTTGCAT 462805 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 463682 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 463623 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | ||||| ||||| || || || || || ||||| ||| | || | || | Sbjct 463622 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC-CTGAATCTTGGCCTTGAC 463564 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||| ||||||| ||| | ||||||||| ||||| || | Sbjct 463563 GTTG-TCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTCT 463505 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| || ||||| Sbjct 463504 TGACAAAGATTTGCAT 463489 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 689992 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 689933 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 689932 AAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 689873 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || || Sbjct 689872 TTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 689813 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 689812 ACGAAGATTTGCAT 689799 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 462770 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 462711 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| || || || || || ||||| ||| || || | Sbjct 462710 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 462651 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || || Sbjct 462650 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 462591 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 462590 ACGAAGATTTGCAT 462577 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 463226 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 463167 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| || || || || || ||||| ||| || || | Sbjct 463166 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 463107 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || || Sbjct 463106 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 463047 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 463046 ACGAAGATTTGCAT 463033 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| |||||||| || || || | Sbjct 463454 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCG 463395 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| || || || || || ||||| ||| || || | Sbjct 463394 AAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 463335 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | |||||| || ||||| || || Sbjct 463334 TTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTG 463275 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 463274 ACGAAGATTTGCAT 463261 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || || | Sbjct 689764 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCG 689705 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 689704 AAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 689645 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||||| ||| | ||| || |||||||| || || Sbjct 689644 TTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTG 689585 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 689584 ACGAAGATTTGCAT 689571 >seq63 Length=908128 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | || | || || || | | | ||||||||||| ||||||||||| Sbjct 127776 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 127717 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||| || || |||| |||| ||||| || ||||| || || Sbjct 127716 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 127657 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||||| |||||| ||| Sbjct 127656 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 127597 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | ||| || || || ||||| || || || || ||| || Sbjct 127596 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 127549 >seq55 Length=1512399 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || || || | | | ||||||||||| ||||||||||| Sbjct 1270402 CCACCGCGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1270461 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||||| || || |||| |||| ||||| || ||||| || || Sbjct 1270462 AGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGA 1270521 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||||| ||||| ||| Sbjct 1270522 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACC 1270581 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613 |||| || | || || || || || || || || || || |||| Sbjct 1270582 TCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATTTGCA 1270627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261488117840