Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq101 161 9e-35
>seq101
Length=1647458
Score = 161 bits (178), Expect = 9e-35
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | ||| ||||| || || || ||||| ||| |
Sbjct 690025 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 689966
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| || ||||| || |||||| |||||||||||||||| || |||||
Sbjct 689965 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGA 689906
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| || ||||| ||||| ||| ||||||| ||||||
Sbjct 689905 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT-CGATCGTGTCCGACGACTCGAC 689847
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||||||||||||||| || || || || || |||||
Sbjct 689846 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 689799
Score = 161 bits (178), Expect = 9e-35
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | ||| ||||| || || |||||||| ||| |
Sbjct 690253 CCACCACGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCG 690194
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| || ||||| || |||||| |||||||||||||||| || |||||
Sbjct 690193 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 690134
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| || || ||||| ||||| ||| ||||||| ||||||
Sbjct 690133 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT-CGATCGTGTCCGACGACTCGAC 690075
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||||||||||||||| || || ||||| || |||||
Sbjct 690074 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 690027
Score = 156 bits (172), Expect = 4e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | ||| ||||| || || || ||||| ||| |
Sbjct 689797 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 689738
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| || |||||| |||||||||||||||| || |||||
Sbjct 689737 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 689678
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| || ||||| |||| |||| ||||||| ||||||
Sbjct 689677 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCGATCGTGTCCGACGACTCGAC 689619
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||| ||||| ||||| || || || || || |||||
Sbjct 689618 CTCGAGCGTGATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 689571
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | ||| ||||| || || || ||||| ||| |
Sbjct 463031 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 462972
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| || ||||| || |||||| |||||||||||||||| || || ||
Sbjct 462971 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGG 462912
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| || || ||||| |||| |||| ||||||| ||||||
Sbjct 462911 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG-TCGATCGTGTCCGACGACTCGAC 462853
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | |||||| |||||||| || || ||||| || |||||
Sbjct 462852 CTCGAGCGTGATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 462805
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | ||| ||||| || || || ||||| ||| |
Sbjct 463715 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 463656
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| || ||||| || |||||| |||||||||||||||| || || ||
Sbjct 463655 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGG 463596
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| || || ||||| |||| |||| ||||||| ||||||
Sbjct 463595 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG-TCGATCGTGTCCGACGACTCGAC 463537
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | |||||| |||||||| || || ||||| || |||||
Sbjct 463536 CTCGAGCGTGATCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 463489
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | ||| ||||| || || || ||||| ||| |
Sbjct 462803 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 462744
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| || ||||| || |||||| |||||||||||||||| || || ||
Sbjct 462743 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGG 462684
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| || ||| | ||||| ||| ||||||| ||| ||
Sbjct 462683 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGT-CGATCGTGTCCGACGACTCAAC 462625
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||||||||||||||| || || || || || |||||
Sbjct 462624 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 462577
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | ||| ||||| || || || ||||| ||| |
Sbjct 463259 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 463200
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| || ||||| || |||||| |||||||||||||||| || || ||
Sbjct 463199 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGG 463140
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| || ||| | ||||| ||| ||||||| ||| ||
Sbjct 463139 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGT-CGATCGTGTCCGACGACTCAAC 463081
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||||||||||||||| || || || || || |||||
Sbjct 463080 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463033
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | ||| ||||| || || || ||||| ||| |
Sbjct 463487 CCACCGCGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 463428
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| || ||||| || |||||| |||||||||||||||| || || ||
Sbjct 463427 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGG 463368
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| || ||| | ||||| ||| ||||||| ||| ||
Sbjct 463367 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGT-CGATCGTGTCCGACGACTCAAC 463309
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | ||||||||||||||| || || || || || |||||
Sbjct 463308 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463261
Score = 140 bits (154), Expect = 3e-28
Identities = 178/240 (74%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 126875 TACTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATA 126934
|||| ||||| ||| || || | || | |||||| || | ||| ||||| || || ||
Sbjct 463953 TACT-TACTG-TCCGCCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATG 463896
Query 126935 TTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGC 126994
|| || ||| | | ||| || ||| || ||||| || |||||| ||||||||||||||
Sbjct 463895 TTATAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGC 463836
Query 126995 TGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTC 127053
|| || || || ||||||||||||||| || || ||||| ||||| ||| |||||
Sbjct 463835 TGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT-CGATCGTGTC 463777
Query 127054 CGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||| || |||| || | ||||||||||||||| || || || || || |||||
Sbjct 463776 CGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499926267280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |