Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq109 102 1e-16 >seq109 Length=1214152 Score = 102 bits (112), Expect = 1e-16 Identities = 345/529 (65%), Gaps = 14/529 (3%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| ||||| ||| |||||| || | | || |||||||| || | | | | || Sbjct 12127 CTCCATGAACAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCTTC 12068 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || | ||||| | |||||| || || | | |||||||||||||||||| | Sbjct 12067 CTTGCCGTGATTCTTGCGAAGGTCCAGG-AACTCGAAGACGTCGGCGTGCCACGGCTCGA 12009 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||| ||||| || ||| | | Sbjct 12008 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 11949 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 |||| | || |||||||| || || | || || | | |||||||||| | |||| Sbjct 11948 TGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGAGTAGCCGTTCGTGCCGGCGATGT 11889 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 ||||| || | | |||| |||| || || || || | ||||| || Sbjct 11888 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTTAAACCGATACCACCGGCGGTCTTGGAGA 11829 Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 | | |||||| ||||| || ||| |||||||||| | || || |||||| || || Sbjct 11828 TGAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCAATCGAGTCGTCCTTCATCGTG 11770 Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581 |||| ||||||| | |||| || || ||| || || | ||||||||| || Sbjct 11769 ACCAAGAAGCACGACGAGAGCTGCGGGTGAG-GGGTACCGGCATTGAAGAGCGTCGGCGA 11711 Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCA 205637 ||||||| ||||| | ||||| ||| |||||| || || |||| ||| | Sbjct 11710 GGCGTGGGTGAAG----TAGCGCTCGGACATGAGGTTGTAGGACTGCAAGACGCGCTCGA 11655 Query 205638 GATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686 ||| ||||| || || | ||||| | ||||| | ||| || || Sbjct 11654 TGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGG 11606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153738902320