Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq109 102 1e-16
>seq109
Length=1214152
Score = 102 bits (112), Expect = 1e-16
Identities = 345/529 (65%), Gaps = 14/529 (3%)
Strand=Plus/Minus
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|||||| ||||| ||| |||||| || | | || |||||||| || | | | | ||
Sbjct 12127 CTCCATGAACAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCTTC 12068
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283
| || | ||||| | |||||| || || | | |||||||||||||||||| |
Sbjct 12067 CTTGCCGTGATTCTTGCGAAGGTCCAGG-AACTCGAAGACGTCGGCGTGCCACGGCTCGA 12009
Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343
| | || | || || || | |||||| ||||| ||||| || ||| | |
Sbjct 12008 GGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGT 11949
Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403
|||| | || |||||||| || || | || || | | |||||||||| | ||||
Sbjct 11948 TGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGAGTAGCCGTTCGTGCCGGCGATGT 11889
Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463
||||| || | | |||| |||| || || || || | ||||| ||
Sbjct 11888 AGGAGCCGGTCGCGCGGATGTTGTGGATGCTTAAACCGATACCACCGGCGGTCTTGGAGA 11829
Query 205464 TCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522
| | |||||| ||||| || ||| |||||||||| | || || |||||| || ||
Sbjct 11828 TGAGCGCGCACGTCTTG-AGCGTGTCGTAGATGCCTTCAATCGAGTCGTCCTTCATCGTG 11770
Query 205523 ACCAGATAGCACGAAGCCAGCT-TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCT 205581
|||| ||||||| | |||| || || ||| || || | ||||||||| ||
Sbjct 11769 ACCAAGAAGCACGACGAGAGCTGCGGGTGAG-GGGTACCGGCATTGAAGAGCGTCGGCGA 11711
Query 205582 GGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCA 205637
||||||| ||||| | ||||| ||| |||||| || || |||| ||| |
Sbjct 11710 GGCGTGGGTGAAG----TAGCGCTCGGACATGAGGTTGTAGGACTGCAAGACGCGCTCGA 11655
Query 205638 GATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGG 205686
||| ||||| || || | ||||| | ||||| | ||| || ||
Sbjct 11654 TGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGG 11606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153738902320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |