Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq101 159 4e-34 seq63 134 2e-26 seq55 123 3e-23 >seq101 Length=1647458 Score = 159 bits (176), Expect = 4e-34 Identities = 167/217 (77%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| |||||||||||||||| || || || | Sbjct 690242 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCC 690183 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 690182 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTT 690123 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 690122 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 690064 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || |||||||||||||| Sbjct 690063 TCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 690027 Score = 154 bits (170), Expect = 2e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || ||||| | Sbjct 689786 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 689727 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 689726 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTT 689667 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 689666 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 689608 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || ||||| ||||| || || || ||||||||||| Sbjct 689607 TCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 689571 Score = 154 bits (170), Expect = 2e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 690014 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 689955 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 689954 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTT 689895 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 689894 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 689836 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || || ||||||||||| Sbjct 689835 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 689799 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 462792 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 462733 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 462732 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 462673 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||| | ||| | | | |||||| ||| || || || | ||||| Sbjct 462672 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 462614 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || || ||||||||||| Sbjct 462613 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 462577 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 463020 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 462961 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 462960 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 462901 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 462900 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 462842 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || ||||| || || |||||||||||||| Sbjct 462841 TCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 462805 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 463248 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463189 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 463188 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463129 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||| | ||| | | | |||||| ||| || || || | ||||| Sbjct 463128 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 463070 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || || ||||||||||| Sbjct 463069 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463033 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 463476 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463417 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 463416 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463357 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| ||| | ||| | | | |||||| ||| || || || | ||||| Sbjct 463356 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 463298 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||| ||||| || || || ||||||||||| Sbjct 463297 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463261 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| ||||| || |||||| ||||| |||||||||| || || || | Sbjct 463704 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463645 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || |||||| Sbjct 463644 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463585 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 463584 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 463526 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| || ||||| || || |||||||||||||| Sbjct 463525 TCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 463489 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||||| || || || | || |||||||||||||| ||||| Sbjct 463908 CTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 463849 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | || |||||||||| ||||| ||||| ||| Sbjct 463848 GATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGT 463790 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || || || | |||||| |||||||| ||||| || || | Sbjct 463789 TGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGA 463730 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 463729 CGAAGATTTGCAT 463717 >seq63 Length=908128 Score = 134 bits (148), Expect = 2e-26 Identities = 146/191 (76%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | |||||||| | || |||||||||||||||||||| Sbjct 127741 CTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 127682 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | ||| | || |||||||| |||||| ||||| ||| Sbjct 127681 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 127623 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| ||| || || || | ||||| || |||||||| || || || | Sbjct 127622 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 127563 Query 46581 CAAAGATTTGC 46591 | ||||||||| Sbjct 127562 CGAAGATTTGC 127552 >seq55 Length=1512399 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | ||||| || | || |||||||||||||||||||| Sbjct 1270437 CTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAA 1270496 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | || | | |||||||| |||||| ||||| ||| Sbjct 1270497 GATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 1270555 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| || || || || | |||||||| |||||||| || || || | Sbjct 1270556 TGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGA 1270615 Query 46581 CAAAGATTTGCA 46592 | |||||||||| Sbjct 1270616 CGAAGATTTGCA 1270627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237361374440