Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq101 159 4e-34
seq63 134 2e-26
seq55 123 3e-23
>seq101
Length=1647458
Score = 159 bits (176), Expect = 4e-34
Identities = 167/217 (77%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || |||||| |||||||||||||||| || || || |
Sbjct 690242 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCC 690183
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||||
Sbjct 690182 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTT 690123
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| ||||| ||||| ||| | | | |||||| ||| || || || | |||||
Sbjct 690122 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 690064
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||||||| ||||| || || ||||||||||||||
Sbjct 690063 TCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 690027
Score = 154 bits (170), Expect = 2e-32
Identities = 166/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || |||||| ||||| |||||||||| || ||||| |
Sbjct 689786 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 689727
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||||
Sbjct 689726 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTT 689667
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| |||||| ||||| ||| | | | |||||| ||| || || || | |||||
Sbjct 689666 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 689608
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || ||||| ||||| || || || |||||||||||
Sbjct 689607 TCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 689571
Score = 154 bits (170), Expect = 2e-32
Identities = 166/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || |||||| ||||| |||||||||| || || || |
Sbjct 690014 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 689955
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||||
Sbjct 689954 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTT 689895
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| |||||| ||||| ||| | | | |||||| ||| || || || | |||||
Sbjct 689894 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 689836
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||||||| ||||| || || || |||||||||||
Sbjct 689835 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 689799
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || |||||| ||||| |||||||||| || || || |
Sbjct 462792 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 462733
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||||
Sbjct 462732 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 462673
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| |||||| ||| | ||| | | | |||||| ||| || || || | |||||
Sbjct 462672 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 462614
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||||||| ||||| || || || |||||||||||
Sbjct 462613 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 462577
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || |||||| ||||| |||||||||| || || || |
Sbjct 463020 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 462961
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||||
Sbjct 462960 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 462901
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| ||||| ||||| ||| | | | |||||| ||| || || || | |||||
Sbjct 462900 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 462842
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| ||||| || ||||| || || ||||||||||||||
Sbjct 462841 TCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 462805
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || |||||| ||||| |||||||||| || || || |
Sbjct 463248 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463189
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||||
Sbjct 463188 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463129
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| |||||| ||| | ||| | | | |||||| ||| || || || | |||||
Sbjct 463128 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 463070
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||||||| ||||| || || || |||||||||||
Sbjct 463069 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463033
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || |||||| ||||| |||||||||| || || || |
Sbjct 463476 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463417
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||||
Sbjct 463416 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463357
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| |||||| ||| | ||| | | | |||||| ||| || || || | |||||
Sbjct 463356 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGA 463298
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||||||| ||||| || || || |||||||||||
Sbjct 463297 TCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463261
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || |||||| ||||| |||||||||| || || || |
Sbjct 463704 ACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCC 463645
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||||
Sbjct 463644 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTT 463585
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
|||| ||||| ||||| ||| | | | |||||| ||| || || || | |||||
Sbjct 463584 GTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 463526
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| ||||| || ||||| || || ||||||||||||||
Sbjct 463525 TCGTTTTACCGGTCAGGGTCTTGACAAAGATTTGCAT 463489
Score = 138 bits (152), Expect = 1e-27
Identities = 148/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| || ||||||| || || || | || |||||||||||||| |||||
Sbjct 463908 CTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAA 463849
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||||||||| | || | || |||||||||| ||||| ||||| |||
Sbjct 463848 GATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGT 463790
Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| ||| || || || | |||||| |||||||| ||||| || || |
Sbjct 463789 TGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGA 463730
Query 46581 CAAAGATTTGCAT 46593
| |||||||||||
Sbjct 463729 CGAAGATTTGCAT 463717
>seq63
Length=908128
Score = 134 bits (148), Expect = 2e-26
Identities = 146/191 (76%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| |||||||| | |||||||| | || ||||||||||||||||||||
Sbjct 127741 CTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 127682
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||| | ||| | || |||||||| |||||| ||||| |||
Sbjct 127681 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 127623
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| ||| || || || | ||||| || |||||||| || || || |
Sbjct 127622 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 127563
Query 46581 CAAAGATTTGC 46591
| |||||||||
Sbjct 127562 CGAAGATTTGC 127552
>seq55
Length=1512399
Score = 123 bits (136), Expect = 3e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| |||||||| | ||||| || | || ||||||||||||||||||||
Sbjct 1270437 CTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCCTCGAGCTGCTTGCCGGCGAA 1270496
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||| | || | | |||||||| |||||| ||||| |||
Sbjct 1270497 GATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 1270555
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| || || || || | |||||||| |||||||| || || || |
Sbjct 1270556 TGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGGGTCTTGA 1270615
Query 46581 CAAAGATTTGCA 46592
| ||||||||||
Sbjct 1270616 CGAAGATTTGCA 1270627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237361374440
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