Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq109 158 1e-33 seq55 150 2e-31 seq101 132 5e-26 seq63 131 2e-25 >seq109 Length=1214152 Score = 158 bits (174), Expect = 1e-33 Identities = 169/223 (76%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 |||||| || ||||| ||||| || || ||| | ||| || || | ||| ||||| Sbjct 63125 GATTTGGAAACCGTAGAAGCATCGAGCTTCGGCGGACTGGACCTCACCGGAGAACCGCTC 63184 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||| || |||||||||||||||||| |||||||| ||||| || |||||| ||| Sbjct 63185 GACCAAGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGCGAGAT 63244 Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | |||||||| | | | | | ||||||||| || |||||||||||| ||| Sbjct 63245 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 63304 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 || ||| ||| ||||||| || || |||||||| || |||||| Sbjct 63305 CATCTCTTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTAC 63347 >seq55 Length=1512399 Score = 150 bits (166), Expect = 2e-31 Identities = 164/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 ||||||| ||||| || || || |||||||| ||||||||| |||| |||||| || ||| Sbjct 1270627 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1270568 Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||| | | |||| | || | || |||| ||||| || ||||||||| | ||||| Sbjct 1270567 ACACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 1270509 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 1270508 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAAC 1270449 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| |||| || || |||||||| || Sbjct 1270448 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCG 1270414 Score = 138 bits (152), Expect = 1e-27 Identities = 166/225 (74%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||| |||||||| |||||||||| |||||| | | |||||| || | ||| | ||| Sbjct 263725 GATCTGAAAGCCATAAAAGCACCTCGCCTCTGCGAACTGCACCTCACTCGAGAACCTCTC 263784 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||| ||| || || |||| |||||| |||||||||||||| || || || ||| Sbjct 263785 GACCAAATTCTCATTCACGACGCCGTCCGAAGCGGCGAAAAAGGCGAGTACATGGGCGAT 263844 Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | ||| |||| || ||| | | | | ||||||| | ||| ||| ||||| Sbjct 263845 GAAGTAGCGTTCGTCGTTGTTGAGCTTGTGGTGCCAGTCGTGGAGGTCGTTGCCGAGGTC 263904 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||| ||| ||| |||||| ||||||| ||||| ||||||||| Sbjct 263905 GATCTCTTCGGCGGACCAAAAGGACGCCTGGGCTTGTTTGTACAT 263949 >seq101 Length=1647458 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| ||||| |||| |||||| | | Sbjct 689799 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 689858 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 689859 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCA 689917 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 689918 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 689977 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 689978 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 690014 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| ||||| |||| || ||| | | Sbjct 462577 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 462636 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 462637 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 462695 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 462696 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 462755 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 462756 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 462792 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| ||||| |||| || ||| | | Sbjct 463033 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 463092 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 463093 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 463151 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 463152 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463211 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 463212 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 463248 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || |||||||| ||||| |||| || ||| | | Sbjct 463261 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 463320 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 463321 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 463379 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 463380 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463439 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 463440 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 463476 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| | | Sbjct 689571 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 689630 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || || | ||||| Sbjct 689631 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCA 689689 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 689690 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 689749 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 689750 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 689786 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || || ||||| ||||| |||| |||||| | | Sbjct 462805 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 462864 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| || ||| | ||||| Sbjct 462865 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 462923 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 462924 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 462983 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 462984 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 463020 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || || ||||| ||||| |||| |||||| | | Sbjct 463489 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 463548 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| || ||| | ||||| Sbjct 463549 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 463607 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 463608 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 463667 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||| |||| |||||||| ||| Sbjct 463668 CATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGT 463704 >seq63 Length=908128 Score = 131 bits (144), Expect = 2e-25 Identities = 161/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 |||||| ||||| || || || |||||||| || |||||| |||| |||||| | |||| Sbjct 127552 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 127611 Query 38306 CAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363 || | | |||| | || | || |||| ||||| || || || |||||| ||||| Sbjct 127612 CACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 127669 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 127670 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAAC 127729 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||||| |||| || || ||||| || || Sbjct 127730 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCG 127764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171880932480