Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq109 154 2e-32
seq91 134 2e-26
seq55 127 3e-24
seq90 107 2e-18
>seq109
Length=1214152
Score = 154 bits (170), Expect = 2e-32
Identities = 524/807 (65%), Gaps = 21/807 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| ||||| |||| ||||| || | || || || ||
Sbjct 11606 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 11665
Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
||| || | ||| || |||||| | | || |||| |||||| | || || |||||
Sbjct 11666 TTGCAGTCCTACAACCTCATGTCCGAGCGCTAC-TTCACCCACGCCTCGCCGACGCTCTT 11724
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
||| || ||||| || || || | || || ||| | | | | ||||| ||
Sbjct 11725 CAATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGA 11784
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| || | ||||| |||| ||| |||| || || | ||||| ||| || ||
Sbjct 11785 CTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 11844
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTACA 111908
||||||||| | |||||| | || | || | | | ||| | || || ||
Sbjct 11845 TGGTATCGGTTTAAGCATCCACAACATCCGCGCGACC--GGCTCCTACATCGCCGGCACG 11902
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|| || | || |||| || | || ||||| ||||| | ||| ||| ||||||||
Sbjct 11903 AACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAACACCGCGCGCTAC 11962
Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022
|| |||||| ||| ||||| | ||| | |||| |||| || ||||| |||
Sbjct 11963 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGG 12019
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080
||||| || || | |||||||| || | || || || || | || || | |||
Sbjct 12020 CACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAAGAAGTCCGC 12079
Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140
| | || |||||||||| || |||||||| || ||||| |||||| || | || ||||
Sbjct 12080 GCT--CGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGTGTCGAGG 12137
Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200
||| | ||| | ||||| || || | | |||| ||||| ||| ||| | | |
Sbjct 12138 CCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAAGTCTACG 12197
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260
| || ||||| | ||| | | |||||||| | || |||| || | |||
Sbjct 12198 GCGAAGAGTTCCGCGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAAGAAGACCA 12257
Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319
| || || || | | | ||| | || || ||| || | || |||||| || | ||
Sbjct 12258 TCCCCGC-GCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGCAACCCC 12316
Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379
| ||||| ||||| |||||| ||| ||||| || |||||||| | || ||||
Sbjct 12317 TTCATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGGCACGATC 12376
Query 112380 AAGAGTTCCAACCTCTGTACAGAAATC 112406
|| || ||||| || || || |||
Sbjct 12377 AAATCGTCGAACCTGTGCACCGAGATC 12403
>seq91
Length=119584
Score = 134 bits (148), Expect = 2e-26
Identities = 270/395 (68%), Gaps = 4/395 (1%)
Strand=Plus/Minus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| |||||||| | || ||| ||| || ||||| ||| | || |||
Sbjct 72166 CCGCTTCTACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGAGACCCCTCAATC 72107
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
||| ||| ||||||||||| || ||| ||||||||| | ||| | || ||
Sbjct 72106 CGAAACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 72047
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| || |||||||||||
Sbjct 72046 GATCGTCAAGAACTACCGCGAGTCATACGACATGTACGCGTGCAATGGTATCCTCTTCAA 71987
Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGATTAC-CGAGGGTATC 13829
||| || || || | || ||| ||| ||| || || | ||||||| | ||| | | ||
Sbjct 71986 CCACGAGTCCCCACGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATTTCGCGA-GCTGTC 71929
Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889
| ||| ||| || |||| | | | | | || ||||| | || || |
Sbjct 71928 GCCGAGATCTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGT 71869
Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949
|||||||| || ||| |||||||| || | |||||| | |||||||| || ||
Sbjct 71868 GATTGGGGACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTTCAGCAGGACACC 71809
Query 13950 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984
||||||| | ||| | || ||||||||||||||
Sbjct 71808 CCCGACGACTTTGTTCTCGCGACGGGTGAGACCCA 71774
>seq55
Length=1512399
Score = 127 bits (140), Expect = 3e-24
Identities = 250/361 (69%), Gaps = 14/361 (4%)
Strand=Plus/Minus
Query 176722 ATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAG 176781
||||| || | ||||||||||||||| || |||| ||| ||| | ||||||||||||
Sbjct 469978 ATTGATGATCAAACCCTTGATGTGGGATCCATCGTGATCCTGATCGGCCATGATCATGAG 469919
Query 176782 ACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGAT 176841
|| || || ||| | || || || | || ||||| || |||||||||||
Sbjct 469918 CTTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGAT 469859
Query 176842 CTTCTTGAGATCG-TTGAACTCTTGGTTTGATGT-GAGCTGTG---TGACAGAGGCATCA 176896
|| ||| ||||| ||||| ||| || | ||| |||| | || | | || |||
Sbjct 469858 CTGCTT--GATCGCTTGAA-TCTCGGCAT--TGTCGAGCAAGGCCTTGCCCGCCGCTTCA 469804
Query 176897 CGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACA 176956
|| || || |||| || || | || |||||||| |||| || ||||| || ||
Sbjct 469803 CGCACGTTGAGCAACTTTCCTCGCAAGGGAAAGACACCATAGTTGTCTCGACCGACGACG 469744
Query 176957 GAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACAC 177016
| ||||| | || ||||||| ||| |||||||| || || |||| |||||| || |||
Sbjct 469743 GCCAGACCGGACACGGCGAGCGCTTTGGCAGAATCTCCTTCGGTCAAGATGAGCGTGCAC 469684
Query 177017 TTG--CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAA 177074
||| || | | | ||| || || ||||||||||| || | ||| ||||| | ||
Sbjct 469683 TTGGACCCGTTCCT--CGTTCCAGCGTTGTTCGCATCCTCGAGCTTGACGATACCCGAAA 469626
Query 177075 T 177075
|
Sbjct 469625 T 469625
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305
||||||||||| ||||| |||||||| || ||||| |||||||||||||| ||||| ||
Sbjct 263249 TGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAACGAGCTCATCTCCCGC 263190
Query 102306 GACGAGGGACTCCA 102319
||||| || |||||
Sbjct 263189 GACGAAGGTCTCCA 263176
>seq90
Length=1545510
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| || ||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 1277348 CCGCTTCTACCAGGCCTCGACGTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 1277289
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 1277288 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 1277229
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| |||| || ||| ||| |||||||||||
Sbjct 1277228 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTTCGCGTGCAACGGTATCCTCTTCAA 1277169
Query 13772 CCATGAATCACC 13783
||| || || ||
Sbjct 1277168 CCACGAGTCCCC 1277157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741259385840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |