Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq109 154 2e-32 seq91 134 2e-26 seq55 127 3e-24 seq90 107 2e-18 >seq109 Length=1214152 Score = 154 bits (170), Expect = 2e-32 Identities = 524/807 (65%), Gaps = 21/807 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| ||||| |||| ||||| || | || || || || Sbjct 11606 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 11665 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 ||| || | ||| || |||||| | | || |||| |||||| | || || ||||| Sbjct 11666 TTGCAGTCCTACAACCTCATGTCCGAGCGCTAC-TTCACCCACGCCTCGCCGACGCTCTT 11724 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| || ||||| || || || | || || ||| | | | | ||||| || Sbjct 11725 CAATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGA 11784 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || || | ||||| |||| ||| |||| || || | ||||| ||| || || Sbjct 11785 CTCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 11844 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTACA 111908 ||||||||| | |||||| | || | || | | | ||| | || || || Sbjct 11845 TGGTATCGGTTTAAGCATCCACAACATCCGCGCGACC--GGCTCCTACATCGCCGGCACG 11902 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || | || |||| || | || ||||| ||||| | ||| ||| |||||||| Sbjct 11903 AACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAACACCGCGCGCTAC 11962 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||||| ||| ||||| | ||| | |||| |||| || ||||| ||| Sbjct 11963 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGG 12019 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080 ||||| || || | |||||||| || | || || || || | || || | ||| Sbjct 12020 CACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAAGAAGTCCGC 12079 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | | || |||||||||| || |||||||| || ||||| |||||| || | || |||| Sbjct 12080 GCT--CGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGTGTCGAGG 12137 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| | ||| | ||||| || || | | |||| ||||| ||| ||| | | | Sbjct 12138 CCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAAGTCTACG 12197 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 | || ||||| | ||| | | |||||||| | || |||| || | ||| Sbjct 12198 GCGAAGAGTTCCGCGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAAGAAGACCA 12257 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | || || || | | | ||| | || || ||| || | || |||||| || | || Sbjct 12258 TCCCCGC-GCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGCAACCCC 12316 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| |||||| ||| ||||| || |||||||| | || |||| Sbjct 12317 TTCATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGGCACGATC 12376 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATC 112406 || || ||||| || || || ||| Sbjct 12377 AAATCGTCGAACCTGTGCACCGAGATC 12403 >seq91 Length=119584 Score = 134 bits (148), Expect = 2e-26 Identities = 270/395 (68%), Gaps = 4/395 (1%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| |||||||| | || ||| ||| || ||||| ||| | || ||| Sbjct 72166 CCGCTTCTACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGAGACCCCTCAATC 72107 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 ||| ||| ||||||||||| || ||| ||||||||| | ||| | || || Sbjct 72106 CGAAACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 72047 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| ||| || ||| || ||||||||||| Sbjct 72046 GATCGTCAAGAACTACCGCGAGTCATACGACATGTACGCGTGCAATGGTATCCTCTTCAA 71987 Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGATTAC-CGAGGGTATC 13829 ||| || || || | || ||| ||| ||| || || | ||||||| | ||| | | || Sbjct 71986 CCACGAGTCCCCACGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATTTCGCGA-GCTGTC 71929 Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889 | ||| ||| || |||| | | | | | || ||||| | || || | Sbjct 71928 GCCGAGATCTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGT 71869 Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949 |||||||| || ||| |||||||| || | |||||| | |||||||| || || Sbjct 71868 GATTGGGGACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTTCAGCAGGACACC 71809 Query 13950 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984 ||||||| | ||| | || |||||||||||||| Sbjct 71808 CCCGACGACTTTGTTCTCGCGACGGGTGAGACCCA 71774 >seq55 Length=1512399 Score = 127 bits (140), Expect = 3e-24 Identities = 250/361 (69%), Gaps = 14/361 (4%) Strand=Plus/Minus Query 176722 ATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAG 176781 ||||| || | ||||||||||||||| || |||| ||| ||| | |||||||||||| Sbjct 469978 ATTGATGATCAAACCCTTGATGTGGGATCCATCGTGATCCTGATCGGCCATGATCATGAG 469919 Query 176782 ACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGAT 176841 || || || ||| | || || || | || ||||| || ||||||||||| Sbjct 469918 CTTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGAT 469859 Query 176842 CTTCTTGAGATCG-TTGAACTCTTGGTTTGATGT-GAGCTGTG---TGACAGAGGCATCA 176896 || ||| ||||| ||||| ||| || | ||| |||| | || | | || ||| Sbjct 469858 CTGCTT--GATCGCTTGAA-TCTCGGCAT--TGTCGAGCAAGGCCTTGCCCGCCGCTTCA 469804 Query 176897 CGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACA 176956 || || || |||| || || | || |||||||| |||| || ||||| || || Sbjct 469803 CGCACGTTGAGCAACTTTCCTCGCAAGGGAAAGACACCATAGTTGTCTCGACCGACGACG 469744 Query 176957 GAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACAC 177016 | ||||| | || ||||||| ||| |||||||| || || |||| |||||| || ||| Sbjct 469743 GCCAGACCGGACACGGCGAGCGCTTTGGCAGAATCTCCTTCGGTCAAGATGAGCGTGCAC 469684 Query 177017 TTG--CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAA 177074 ||| || | | | ||| || || ||||||||||| || | ||| ||||| | || Sbjct 469683 TTGGACCCGTTCCT--CGTTCCAGCGTTGTTCGCATCCTCGAGCTTGACGATACCCGAAA 469626 Query 177075 T 177075 | Sbjct 469625 T 469625 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 ||||||||||| ||||| |||||||| || ||||| |||||||||||||| ||||| || Sbjct 263249 TGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAACGAGCTCATCTCCCGC 263190 Query 102306 GACGAGGGACTCCA 102319 ||||| || ||||| Sbjct 263189 GACGAAGGTCTCCA 263176 >seq90 Length=1545510 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| || ||||| | || ||| ||| || ||||| ||| | || || Sbjct 1277348 CCGCTTCTACCAGGCCTCGACGTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 1277289 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711 |||| ||| ||||||||||| |||||| |||||||||| | ||| | || || Sbjct 1277288 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 1277229 Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771 | |||| ||||| ||||||||||| |||| |||| || ||| ||| ||||||||||| Sbjct 1277228 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTTCGCGTGCAACGGTATCCTCTTCAA 1277169 Query 13772 CCATGAATCACC 13783 ||| || || || Sbjct 1277168 CCACGAGTCCCC 1277157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741259385840