Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq109 190 2e-43
seq91 152 6e-32
seq90 116 4e-21
>seq109
Length=1214152
Score = 190 bits (210), Expect = 2e-43
Identities = 556/850 (65%), Gaps = 15/850 (2%)
Strand=Plus/Minus
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522
||||| || ||||| ||||| ||||| ||| || | | | |||||| | || ||
Sbjct 12456 GCGATCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCG 12397
Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582
|| |||| ||| || || ||||| || | ||||||||||| |||||||||
Sbjct 12396 GTGCACAGGTTCGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCG 12337
Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642
|| ||||||||||||||| |||| | || ||||| ||| | || ||| || || | |
Sbjct 12336 GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTAC 12277
Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701
|| | | | || || || | | ||||| || |||||| |||||||| | |
Sbjct 12276 CAAAGCTTTTGC-GCGGGGATGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCGAA 12218
Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761
||| | ||||| || || | ||| ||| || || |||| | | || |||||
Sbjct 12217 CAGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAA 12158
Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821
|| | ||| | || | |||| || |||| |||||| || || || ||||| || |
Sbjct 12157 GAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGC 12098
Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881
| |||||||| | | || | ||||| | || || || || | || |||||
Sbjct 12097 AAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAA 12038
Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 106939
||| | || || |||||||| ||||| || |||| |||| | ||| |||||
Sbjct 12037 CTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 11981
Query 106940 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995
||| |||| | || |||||||| ||| ||| | ||||| ||||| || | ||
Sbjct 11980 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGAT 11921
Query 106996 ACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGG 107053
|||| || | || || || || ||| || ||| | || | | | |||
Sbjct 11920 GCCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAG--CCGGTCGCGCGGATGTTGTGG 11863
Query 107054 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 107113
||| | || ||||| || || ||| ||||| |||| ||| | | || || |
Sbjct 11862 ATGCTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCG 11803
Query 107114 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 107173
||||| || | || ||||| ||||| | | || | |||||| || | ||||||
Sbjct 11802 TAGATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGG 11743
Query 107174 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATC 107233
|| ||||| ||||||||||| || || | ||||| |||| | | ||||||
Sbjct 11742 TGAGGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATG 11683
Query 107234 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGC 107293
|| ||| | || |||||| || ||||| | ||||||||||||| ||| ||||||
Sbjct 11682 AGGTTGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGC 11623
Query 107294 ATAAACATGT 107303
|| | |||||
Sbjct 11622 ATGAGCATGT 11613
>seq91
Length=119584
Score = 152 bits (168), Expect = 6e-32
Identities = 274/395 (69%), Gaps = 4/395 (1%)
Strand=Plus/Minus
Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958
|||| |||| |||||||| |||| ||| ||| || ||||| ||| | || |||
Sbjct 72166 CCGCTTCTACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGAGACCCCTCAATC 72107
Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018
||| ||| ||||||||||| || ||| ||||||||| | ||| | || ||
Sbjct 72106 CGAAACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 72047
Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078
| ||||||| || ||||||||||| |||| ||| |||||| || |||||||||||
Sbjct 72046 GATCGTCAAGAACTACCGCGAGTCATACGACATGTACGCGTGCAATGGTATCCTCTTCAA 71987
Query 7079 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGATTAC-CGAGGGTATC 7136
||| || || || | || ||| ||| ||| ||||| | ||||||| | ||| | | ||
Sbjct 71986 CCACGAGTCCCCACGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATTTCGCGA-GCTGTC 71929
Query 7137 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 7196
| ||| ||| || |||| | | | | | || ||||| | || || |
Sbjct 71928 GCCGAGATCTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGT 71869
Query 7197 GATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAA 7256
|||||||| || ||| |||||||| || | ||||||| | |||||||| || ||
Sbjct 71868 GATTGGGGACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTTCAGCAGGACACC 71809
Query 7257 GCCGACGAATATGTAGTAGCAACGGGTGAGACCCA 7291
||||||| | ||| | || ||||||||||||||
Sbjct 71808 CCCGACGACTTTGTTCTCGCGACGGGTGAGACCCA 71774
>seq90
Length=1545510
Score = 116 bits (128), Expect = 4e-21
Identities = 163/226 (72%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958
|||| |||| || ||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 1277348 CCGCTTCTACCAGGCCTCGACGTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 1277289
Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 1277288 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 1277229
Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078
| ||||||| || ||||||||||| |||| |||| |||||| ||| |||||||||||
Sbjct 1277228 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTTCGCGTGCAACGGTATCCTCTTCAA 1277169
Query 7079 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT 7123
||| || || || | || ||| ||| ||| ||||| | ||| ||
Sbjct 1277168 CCACGAGTCCCCCCGCCGTGGTCGCA-CCTTCGTCACGAGGAAAAT 1277124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979715910280
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