Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq55 96.9 2e-15 seq101 95.1 8e-15 seq63 95.1 8e-15 >seq55 Length=1512399 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||||| || | || |||| || Sbjct 1270420 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCCTCG 1270479 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || |||||||||||| | || | || |||||||| Sbjct 1270480 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGG 1270539 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || || ||| || |||| ||| ||||| || Sbjct 1270540 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTG 1270599 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCA 34980 ||||| || ||||| || ||||| |||| Sbjct 1270600 CCCGTAAGGGTCTTGACGAAGATTTGCA 1270627 >seq101 Length=1647458 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||||||||| | || | || |||| || Sbjct 463925 ACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCATCCTCG 463866 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| | Sbjct 463865 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGA 463806 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | |||||| |||| || || ||||| Sbjct 463805 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTG 463746 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| || ||||| |||||| Sbjct 463745 CCGGTCAGGGTCTTGACGAAGATTTGCATA 463716 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| | || | || |||| || Sbjct 463013 ACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCG 462954 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| | Sbjct 462953 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGA 462894 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| || || ||||| Sbjct 462893 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTA 462834 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| |||||||| |||||| Sbjct 462833 CCGGTCAGGGTCTTGACAAAGATTTGCATA 462804 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| | || | || |||| || Sbjct 463697 ACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCG 463638 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| | Sbjct 463637 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGA 463578 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| || || ||||| Sbjct 463577 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTA 463518 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| |||||||| |||||| Sbjct 463517 CCGGTCAGGGTCTTGACAAAGATTTGCATA 463488 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| || || ||||| | || | || |||| || Sbjct 690235 ACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCCATCCTCG 690176 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| | Sbjct 690175 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGA 690116 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| || || ||||| Sbjct 690115 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTG 690056 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| |||||||| |||||| Sbjct 690055 CCGGTCAGGGTCTTGACAAAGATTTGCATA 690026 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| | || | || |||| || Sbjct 463241 ACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCG 463182 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| Sbjct 463181 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 463122 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | |||| || | |||||| |||| || || ||||| Sbjct 463121 ATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTG 463062 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| || ||||| |||||| Sbjct 463061 CCGGTCAGGGTCTTGACGAAGATTTGCATA 463032 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| | || | || |||| || Sbjct 463469 ACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCG 463410 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| Sbjct 463409 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 463350 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | |||| || | |||||| |||| || || ||||| Sbjct 463349 ATCTTGGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTG 463290 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| || ||||| |||||| Sbjct 463289 CCGGTCAGGGTCTTGACGAAGATTTGCATA 463260 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| | || | || |||| || Sbjct 690007 ACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCG 689948 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | ||| ||||||||| | || | ||||||||||| Sbjct 689947 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGG 689888 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| || || ||||| Sbjct 689887 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTG 689828 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||| || ||||| |||||| Sbjct 689827 CCGGTCAGGGTCTTGACGAAGATTTGCATA 689798 >seq63 Length=908128 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||||| || | || |||| || Sbjct 127758 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCG 127699 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || |||||||||||| |||| | || |||||||| Sbjct 127698 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 127639 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | |||| || | ||| || |||| ||| || || || Sbjct 127638 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 127579 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGC 34979 ||||| |||||||| || ||||| ||| Sbjct 127578 CCCGTAAGAGTCTTGACGAAGATTTGC 127552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633018398616