Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq109 206 5e-48 >seq109 Length=1214152 Score = 206 bits (228), Expect = 5e-48 Identities = 789/1227 (64%), Gaps = 24/1227 (2%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| || | || | || |||| ||||||||| || || |||| | ||||| Sbjct 12744 GCCATGTCGCACGAAGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 12685 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || ||| |||||| || | |||| |||| || || Sbjct 12684 AGCTTGCGCGCCTCAGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCATCGGCGAGA 12625 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || |||||||||||||| | ||| | | ||| || || | || ||| | Sbjct 12624 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAATTTTGCGC-CTCGATGAC 12566 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 |||||| ||||| ||||||||| ||| | ||| | | || ||| ||| | Sbjct 12565 GGGGTAGTAGTTGACGTCGATGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTC 12506 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489 | ||| | | |||| |||| | |||| || | || ||| |||| |||| Sbjct 12505 GTGCAGCTTTT------TGAAGTCGTACACGCCGTTCTTGATGAAGCTC-GGCAACGCGA 12453 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTG 213548 | |||| |||||| || || ||| | | ||| | | |||||| |||||||||||| Sbjct 12452 TCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCC-GAGTACTCGATGATCTCGGTG 12394 Query 213549 CACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA 213608 |||||||| || ||| ||||| ||||||| ||||| |||||| ||| || | Sbjct 12393 CACAGGTTCGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCGGCG 12334 Query 213609 TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAG 213668 ||||||||||||||| ||||| |||||||| | ||||| | | || ||| | ||| Sbjct 12333 TCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAA 12274 Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728 || | || || | | || | || | | | ||||||| ||| | Sbjct 12273 AGCTTTTGCGCGGGGATGGTCTTCTTGGC-GCGACCCTCCT--TTTCGTACTTCTCGAAC 12217 Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788 || || ||| || | ||| |||| || || || || ||||| || | | Sbjct 12216 AGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAG 12157 Query 213789 AGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 ||| ||| || ||| | | ||| | || ||||||||| || |||| ||| ||||| Sbjct 12156 AGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCA 12097 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||| || || | | | || ||| || || ||||| || || || || Sbjct 12096 AAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAAC 12037 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965 || |||| ||| |||||||||||||| | |||||| || ||||| || | || | ||| Sbjct 12036 TCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTG 11977 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || || ||||| || | || ||||| ||| |||||| | ||| || | || Sbjct 11976 CCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCA 11917 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAG 214085 || || | ||||| || || || || || ||||||| || | | |||| ||| Sbjct 11916 TTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTT 11857 Query 214086 AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATG 214145 | || || ||||||||| ||||||||| | ||||| | | | || || |||| Sbjct 11856 AAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATG 11797 Query 214146 CCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGAC 214205 || | || ||| || | | | | ||||||||| ||||||||| || | Sbjct 11796 CCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGG 11737 Query 214206 GAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTG 214265 | || | ||||| ||||| || ||| ||| | | | | || | ||| || Sbjct 11736 GTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTG 11677 Query 214266 TAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGC 214325 |||| || || ||| ||||||||| |||||| | ||| | ||| ||| Sbjct 11676 TAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGC 11617 Query 214326 ATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG---AGCAGGTAGGAGCGCTCC 214382 |||||||| || | || || | ||| | | || |||| |||||||||||| Sbjct 11616 ATGTGCTGCGGACGTTC---GGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCG 11560 Query 214383 AGAGTCTTGAACCCAAAGTAGGAGTAG 214409 || |||||||| ||||| ||| |||| Sbjct 11559 AGTGTCTTGAAGCCAAAATAGTTGTAG 11533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531088308480