Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq109 223 6e-53
>seq109
Length=1214152
Score = 223 bits (246), Expect = 6e-53
Identities = 788/1217 (65%), Gaps = 43/1217 (4%)
Strand=Plus/Minus
Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479
|| ||||||||||||||||| |||||| ||||||||| |||| ||||| || |||
Sbjct 12720 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG---CTTGCGCGCCTCAGGCGAA 12664
Query 221480 GTGAAGGGCATACGC--AGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537
||| ||||| ||| || |||| | | ||||| || || || |||||||| ||||
Sbjct 12663 TCGAACGGCAT-CGCCAAGGCCATGAACG-CATCGGCGAGACCTTGCACTCCGATGCCGA 12606
Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597
|||| | ||| | ||||||| ||| || ||||| || ||||||||||||
Sbjct 12605 TGGGGCGGTGGCGGAAGTTGGAATTTTGCGCCTCGATGACGGGGTAGTAGTTGACGTCGA 12546
Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657
| | ||| | ||| | | | ||| || || |||||| |||||| | |||
Sbjct 12545 TGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTCGTGCAGCTTTT------TGA 12492
Query 221658 ACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCA 221717
| | || ||||| || || | | || ||| ||| | || ||||
Sbjct 12491 AGTCGTACACGCCGT--TCTTGATGAAGCTCGGCAAC-GCGATCG----AA-----GCCA 12444
Query 221718 GGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGC 221777
||| || || || |||||| | |||| |||||||| || || |||||
Sbjct 12443 AGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCGGTGCACAGGTTCG 12384
Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGA 221837
| ||||| || || |||| || || || ||||| || || |||||||||||||
Sbjct 12383 ACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCGGCGTCCTTGTAGA 12324
Query 221838 GCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG 221897
|||| ||||| ||| ||||| | ||| ||| | || ||| || ||| || | | |
Sbjct 12323 GCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAAAGCTTTTGCG 12264
Query 221898 CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCA- 221956
|| | ||| ||||| | |||||| |||||| ||| | | || || | |
Sbjct 12263 CGGGGATGGTCTTCTTGGCGCGACCCTC---CTTTTCGTACT---TCTCGAACAGGACGC 12210
Query 221957 --AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014
|||| ||| ||||| | |||| ||||| || | |||||| || | || ||
Sbjct 12209 GGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAGAGGGGCC 12150
Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074
| | | | | | ||| | || |||||| || || |||||||| ||||| ||||
Sbjct 12149 ACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCAAAGAAGA 12090
Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134
|||| | | || || ||| ||||| || || | || |||| ||||| || |
Sbjct 12089 GATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAACTCGAAGA 12030
Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194
||| |||||||||||||| || |||| || | || ||||| |||||||||||||| |
Sbjct 12029 CGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTT 11970
Query 222195 GATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254
| || || | | | |||| ||| ||| || | || || | || || ||
Sbjct 11969 GGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGAGT 11910
Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCG 222313
||||| ||||| ||||| | ||| || | | ||| ||| | | |||
Sbjct 11909 AGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTT-GTGGATGCTTAAACCG 11851
Query 222314 ATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCC 222373
|||||||||||| || ||||| | ||||| ||||||| ||||| |||||| ||
Sbjct 11850 ATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCA 11791
Query 222374 ATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAG 222433
|| ||||| ||||| | | | || || || ||||| | ||| | | | || || |
Sbjct 11790 ATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGGGTACCG 11731
Query 222434 GCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTC 222493
|| || || ||||| || |||||| || ||||||| | ||||| || | ||| | |
Sbjct 11730 GCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTGTAGGAC 11671
Query 222494 TCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTAC 222553
| | ||| | |||||| || ||||| || | |||| | |||| ||||| |
Sbjct 11670 TGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGC 11611
Query 222554 TGGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCT 222611
|| || | || | |||| | | | || |||| ||| || || || ||||
Sbjct 11610 TGCGGACGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGTGTCT 11553
Query 222612 TGAACCCAAAGTAGTTG 222628
|||| ||||| ||||||
Sbjct 11552 TGAAGCCAAAATAGTTG 11536
Score = 95.1 bits (104), Expect = 2e-14
Identities = 156/224 (70%), Gaps = 7/224 (3%)
Strand=Plus/Minus
Query 25488 GTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACAT 25547
|||||||||||| | || |||||||||||||||||| || || ||||||||||
Sbjct 63347 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 63288
Query 25548 GGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTG 25602
| ||| |||| || |||| | || ||||||| | || || | |||| |
Sbjct 63287 GCACGACTGGGACAACAAGCTCAAGCC--CGACGAGCGCTACTTCATCTCGCACGTCCTC 63230
Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662
|| ||||| || || || || || || || |||||||| || |||| | ||| || |
Sbjct 63229 GCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCGGTTCTCCGGT 63170
Query 25663 GAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|| || |||| || || || || |||||||||||||| ||
Sbjct 63169 GAGGTCCAGTCCGCCGAAGCTCGATGCTTCTACGGTTTCCAAAT 63126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843093247680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |