Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq109 188 9e-43 seq91 125 9e-24 seq90 109 7e-19 >seq109 Length=1214152 Score = 188 bits (208), Expect = 9e-43 Identities = 560/857 (65%), Gaps = 15/857 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| ||||| ||||||||||||| | ||||| || ||| Sbjct 11606 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 11665 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 ||| || | ||| || |||||| | | |||| ||||| | || || |||||| Sbjct 11666 TTGCAGTCCTACAACCTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTC 11725 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 ||||| ||||| || |||||| | || |||||| | || | | ||||| ||| Sbjct 11726 AATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGAC 11785 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || || | || ||||| | || || | | ||| |||| ||||| ||| || || Sbjct 11786 TCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 11845 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACAA 75509 ||||| || | |||||| | | | || | ||| || ||| || || | Sbjct 11846 GGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCCGGCACGA 11903 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || | || |||| || | || ||||| ||||| | ||| ||| |||||||| | Sbjct 11904 ACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAACACCGCGCGCTACG 11963 Query 75570 TAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 | | |||| || ||||| | || || ||||| ||||| | || || |||| Sbjct 11964 TCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGGC 12020 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | ||||| || | |||||||| || | || || || || | ||||| | || Sbjct 12021 ACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAAGAAGTCCGCG 12080 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | |||||||| | | || ||||| || || || |||||| |||| || |||| | Sbjct 12081 CTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGTGTCGAGGCCG 12140 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 || | ||| | || ||||| || | | |||| || || ||| ||| | || | Sbjct 12141 CCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAAGTCTACGGCG 12200 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | ||||| | ||| | | ||||| ||| |||||||| | ||||| ||| | | Sbjct 12201 AAGAGTTCCGCGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAAGAAGACCATCC 12260 Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 | || || | | ||||| | || || ||| | | ||| ||||| || | || | Sbjct 12261 CCGC-GCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGCAACCCCTTC 12319 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||||| |||||||| || ||||| ||| ||||||||||| | || || ||||| Sbjct 12320 ATGCTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGGCACGATCAAA 12379 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || || || ||||| || || | |||||| | | | || ||| ||||| ||| Sbjct 12380 TCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCTCCCGACGAGTGCGCTGTCTGC 12439 Query 76043 AATTTGGCATCAATCGC 76059 || ||||| || ||||| Sbjct 12440 AACTTGGCTTCGATCGC 12456 >seq91 Length=119584 Score = 125 bits (138), Expect = 9e-24 Identities = 272/407 (67%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618 || || |||| | | || | ||| ||||| |||||||||| |||| | || || | Sbjct 71753 TCGACGAACTCCTTGACGGGGTGGGTCTCACCCGTCGCGAGAACAAAGTCGTCGGGGGTG 71812 Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 || || |||||||| | ||||||| | || |||||||| ||||| ||||| || | Sbjct 71813 TCCTGCTGAAGCATCATCCACATGCCCTCGACATAGTCGCGCGCATGTCCCCAATCACGC 71872 Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738 || | | ||| ||||| | ||| | || | ||| || | ||| Sbjct 71873 TTGGCCTCCATGTTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGTGAGATCTCGGCGACA 71932 Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798 | | ||||||| | ||||| ||| | ||| || | || || |||||||||||| Sbjct 71933 GCTCGCGAAATCTTCCTCGTGACGAAGGTGCGACCACGACGTGGGGACTCGTGGTTGAAG 71992 Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858 ||||| || ||| || ||||| | || || || ||||| || ||||||| |||| Sbjct 71993 AGGATACCATTGCACGCGTACATGTCGTATGACTCGCGGTAGTTCTTGACGATCCAGAAG 72052 Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918 ||| ||| |||| ||| || || || || ||||||||||| ||| || | ||| Sbjct 72053 GCGTACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTTTCGGATTGA 72112 Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || ||| || || ||| ||| || || ||||||||||| Sbjct 72113 GGGGTCTCGACGACCTTGCCGTACAGCTCGGAGGTCGAGGCTTGGTA 72159 >seq90 Length=1545510 Score = 109 bits (120), Expect = 7e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 || ||| | ||||| ||| | ||| || | || || ||||||||||||||||| ||| Sbjct 1277124 ATTTTCCTCGTGACGAAGGTGCGACCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 1277183 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || |||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 1277184 TTGCACGCGAACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 1277243 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 1277244 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 1277303 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| |||||| || ||||| ||||| Sbjct 1277304 ACGACCTTGCCGTACAACTCCGACGTCGAGGCCTGGTA 1277341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568503803360