Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq101 107 6e-18
>seq101
Length=1647458
Score = 107 bits (118), Expect = 6e-18
Identities = 130/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 251475 GAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACC 251534
||||| || ||||||| || ||||| ||||||||||||||||| ||||||||||||||
Sbjct 1137895 GAAGCCAGCGACACCGTGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACC 1137954
Query 251535 ACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGA 251594
|||||| |||| | |||||| | || || || || | | | | ||||||| |
Sbjct 1137955 ACCATCTCGAGATCGACCCTCCACGGGTTGTCGGGTCAAAATCTGAAGAGGACCGCGAGC 1138014
Query 251595 GCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651
|| || || || || ||||| ||||||||||| |||||| ||| |||||
Sbjct 1138015 ACGAGAGTGAATTTTGTCGTTGACCATGTGCTTGAGACGTTGGTAGTATGTTGGACC 1138071
Score = 87.8 bits (96), Expect = 5e-12
Identities = 109/149 (73%), Gaps = 8/149 (5%)
Strand=Plus/Plus
Query 233274 CACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTTG 233333
||||||||| ||||| |||||||| |||||||| || | ||| ||||||||||| |
Sbjct 1137906 CACCGTGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACCACCATCTCGAG 1137965
Query 233334 ACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCT----TGGACCCTGAGCACGATAA 233389
| | ||||| || | ||| || || |||| ||| ||||| |||||||| |
Sbjct 1137966 ATCGACCCTCCACGGGTTGTCGGGTCAAAA----TCTGAAGAGGACCGCGAGCACGAGAG 1138021
Query 233390 TTAATTTTATCTTTAACCATATGCTTCAG 233418
| |||||| || || ||||| ||||| ||
Sbjct 1138022 TGAATTTTGTCGTTGACCATGTGCTTGAG 1138050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814827923539
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |