Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq55 123 2e-23 seq101 104 2e-17 seq63 104 2e-17 >seq55 Length=1512399 Score = 123 bits (136), Expect = 2e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| ||||| | || || || || || || || || || ||||| || || || ||| Sbjct 1270627 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1270568 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 |||| | || | || || |||||||||||||| |||||||| || || || || | Sbjct 1270567 ACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGC 1270508 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||| ||||| || ||||| |||||| | | | | || || |||| Sbjct 1270507 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAACA 1270448 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | |||||||| ||||| || ||||||||| | || ||||||| || Sbjct 1270447 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGTGG 1270402 >seq101 Length=1647458 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || ||||||||||| || |||||||| || || | | Sbjct 462805 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 462864 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 462865 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 462924 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || ||||| |||||| | | | | || || ||| Sbjct 462925 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAAC 462984 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| | ||||||||| | || | ||||| || Sbjct 462985 ATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGG 463031 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || ||||||||||| || |||||||| || || | | Sbjct 463489 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 463548 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 463549 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 463608 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || ||||| |||||| | | | | || || ||| Sbjct 463609 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAAC 463668 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| | ||||||||| | || | ||||| || Sbjct 463669 ATCCAGAAGGAGTCGACGTTGCACTTGGTGCTCCGTCTCCGCGGTGG 463715 >seq63 Length=908128 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| ||||| | || || || || || || || || || ||||| || || | |||| Sbjct 127552 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 127611 Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825 ||| | || | || || |||||||||||||| ||||| || || || || || || Sbjct 127612 CACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 127671 Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885 |||| | ||||| ||||| || ||||| |||||| | | | | || || ||||| Sbjct 127672 ACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACAT 127731 Query 24886 TCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| ||||| || |||||||| Sbjct 127732 CCAAAAGGAGTCGACCCTCCACTTGGT 127758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896773313160