Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq109 215 7e-50
seq138 114 2e-19
seq55 95.1 2e-13
>seq109
Length=1214152
Score = 215 bits (238), Expect = 7e-50
Identities = 284/393 (72%), Gaps = 17/393 (4%)
Strand=Plus/Plus
Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849
|||| ||| || || ||| | |||||||||||||||||| | ||| | || | |
Sbjct 11594 GTCGCCGAACGTCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGG---TCAC 11650
Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCA-CCTACGAGGCCATGTCGCAGCAGTT 259908
||| |||| || ||| || || ||||| | |||||| ||| |
Sbjct 11651 GACATCGA------------GCGCGT-CTTGCAGTCCTACAACCTCATGTCCGAGCGCTA 11697
Query 259909 GTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTC 259968
|||||| || |||| |||||||| |||||||| || || | ||||||| |||||
Sbjct 11698 CTTCACCCACGCCTCGCCGACGCTCTTCAATGCCGGTACCCCTCACCCGCAGCTCTCGTC 11757
Query 259969 GTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCA 260028
|||||| || | ||||||| ||| ||||| || |||||||| ||||||||||||
Sbjct 11758 GTGCTTCTTGGTCACGATGAAGGACGACTCGATTGAAGGCATCTACGACACGCTCAAGAC 11817
Query 260029 GTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGC 260088
||||||||||||||||||| | ||||| || |||||||| | ||||| | |||||
Sbjct 11818 GTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTAAGCATCCACAACATCCGCGC 11877
Query 260089 CGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCG 260148
| ||| ||||| | || ||||| |||||| | || || ||| | || |||||||| ||
Sbjct 11878 GACCGGCTCCTACATCGCCGGCACGAACGGCTACTCGAATGGCATCGTCCCCATGCTGCG 11937
Query 260149 CGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181
||| | ||| |||| |||||||||||||||||
Sbjct 11938 CGTCTACAACAACACCGCGCGCTACGTCGACCA 11970
Score = 140 bits (154), Expect = 5e-27
Identities = 306/465 (66%), Gaps = 12/465 (3%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|| ||| |||||| || ||||| || |||||| || ||||||||||||||| ||
Sbjct 11972 GGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCCGACGTC 12031
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| | | |||||||| ||||| |||||||| || |||| |||| ||
Sbjct 12032 TTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAA------GGAAGAAGTCCGCGCTCGT 12085
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|||||||| | | || |||| ||| ||||| ||| || | | | ||| | ||
Sbjct 12086 GATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGTGTCGAGGCCGCCGGC 12145
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|| ||| | ||||| ||||| ||||||| |||||||| |||||| ||| |||| |
Sbjct 12146 GAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAAGTCTACGGCGAAGAG 12205
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNC---GCGGACCGTCGTGCCC 262084
|| || ||| | ||| | | |||| || |||
Sbjct 12206 TTCCGCGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAAGAAGACCATC---CCC 12262
Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144
|| | | || | |||| || || ||| |||||| |||||||||||| |||| ||||
Sbjct 12263 GCGCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGCAACCCCTTCATG 12322
Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG 262204
||||||||||||||| ||| | ||||| ||||||| ||||| | | | |
Sbjct 12323 CTCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGGCACGATCAAATCG 12382
Query 262205 GCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAG 262249
| |||||||||||||||||| || ||| ||| | ||| ||||
Sbjct 12383 TCGAACCTGTGCACCGAGATCATCGAGTACTCGGCTCCCGACGAG 12427
>seq138
Length=1296910
Score = 114 bits (126), Expect = 2e-19
Identities = 166/229 (72%), Gaps = 14/229 (6%)
Strand=Plus/Plus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
||||||| | |||||||| |||||| |||| | ||| || |||||| | |||
Sbjct 681546 CAAGGTGTTGAAGCAGGTTCACCCCGACACCGGT-----ATC-TCGAACAAGGCGATGCT 681599
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035
||| | |||||||| ||||||||||| | || ||| ||| | |||||| ||| |
Sbjct 681600 CATCCTCAACTCGTTCGTCAACGACATCTTTGAGCGCCTCGCCGGCGAGGC--GTC--CA 681655
Query 725036 GGCGCGC-TCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTGC 725091
|| ||| ||| |||| ||||| ||| | | || ||||||||||||||| |||| |
Sbjct 681656 AGCTCGCGTCCTACAACCGCAAGTCGACCATCTCGTCGCGCGAGATCCAGACCTCCGTCC 681715
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
| ||||| | | ||| || ||| ||| ||||||| |||| || |||||
Sbjct 681716 GATTGATCCTCCCCGGAGAGCTGTCCAAGCACGCCATCTCGGAAGGCAC 681764
Score = 114 bits (126), Expect = 2e-19
Identities = 166/229 (72%), Gaps = 14/229 (6%)
Strand=Plus/Plus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
||||||| | |||||||| |||||| |||| | ||| || |||||| | |||
Sbjct 727533 CAAGGTGTTGAAGCAGGTTCACCCCGACACCGGT-----ATC-TCGAACAAGGCGATGCT 727586
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035
||| | |||||||| ||||||||||| | || ||| ||| | |||||| ||| |
Sbjct 727587 CATCCTCAACTCGTTCGTCAACGACATCTTTGAGCGCCTCGCCGGCGAGGC--GTC--CA 727642
Query 725036 GGCGCGC-TCCAACAAGCGCAACACGATCGGCACG---CGCGAGATCCAGACCGCCGTGC 725091
|| ||| ||| |||| ||||| ||| | | || ||||||||||||||| |||| |
Sbjct 727643 AGCTCGCGTCCTACAACCGCAAGTCGACCATCTCGTCGCGCGAGATCCAGACCTCCGTCC 727702
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
| ||||| | | ||| || ||| ||| ||||||| |||| || |||||
Sbjct 727703 GATTGATCCTCCCCGGAGAGCTGTCCAAGCACGCCATCTCGGAAGGCAC 727751
Score = 86.0 bits (94), Expect = 9e-11
Identities = 174/252 (69%), Gaps = 15/252 (6%)
Strand=Plus/Minus
Query 724894 CCTCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGC 724953
|||||| |||| ||| || | ||| ||| | || || || |||||| |||| |
Sbjct 1009428 CCTCGT-CTCG-CCTCTA-CAGCAAAGTGTTGAAACAAGTCCACCCCGACACCGGT---- 1009376
Query 724954 CATCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCA 725013
||| || |||||| | ||| ||| | |||||||| ||||||||||| |||| |||
Sbjct 1009375 -ATC-TCGAACAAGGCGATGCTCATCCTCAACTCGTTCGTCAACGACATTTTCGAGCGCC 1009318
Query 725014 TCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAA---CACGATCGGCACGC 725070
||| | |||||| | || ||| | |||| ||||| || ||| |||
Sbjct 1009317 TCGCCGGCGAGGCGTGCAAGCTCGCG---TTGTACAACCGCAAGTCGACCATCTCGTCGC 1009261
Query 725071 GCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCT 725130
||||||| || ||| | || ||| ||||| | | ||| ||| || ||| ||||||| |||
Sbjct 1009260 GCGAGATTCAAACCTCGGTTCGCTTGATCCTCCCCGGAGAATTGTCCAAGCACGCCATCT 1009201
Query 725131 CCGAGGGCACCA 725142
| || || ||||
Sbjct 1009200 CGGAAGGAACCA 1009189
>seq55
Length=1512399
Score = 95.1 bits (104), Expect = 2e-13
Identities = 168/241 (70%), Gaps = 13/241 (5%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| |||| |||||| || ||| || |||| ||||||||| ||||||| ||| ||||||
Sbjct 263959 GATCTGGGCCATGTACAAACAAGCCC-AGGCGTCCTTTTGGTCCGCCGAAGAGATCGACC 263901
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC-------GCTGAGCGACGACGAGCGCCATTTC 1455887
||||| |||| ||||| | || | ||| | | ||||||| ||| | |||
Sbjct 263900 TCGGCAACGAC---CTCCAC-GACTGGCACCACAAGCTCAACAACGACGAACGCTACTTC 263845
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| || || |||||| ||||||||||| || ||| ||||| ||||| |||
Sbjct 263844 ATCGCCCATGTACTCGCC-TTTTTCGCCGCTTCGGACGGCGTCGTGAATGAGAATTTGGT 263786
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| | || || ||||| || || ||||||| | | ||||| || || |||||
Sbjct 263785 CGAGAGGTTCTCGAGTGAGGTGCAGTTCGCAGAGGCGAGGTGCTTTTATGGCTTTCAGAT 263726
Query 1456008 C 1456008
|
Sbjct 263725 C 263725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177797021579814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |