Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq101 134 1e-26 >seq101 Length=1647458 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 690008 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 689949 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | ||||| || |||||||||| Sbjct 689948 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTG 689889 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 689888 GATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTT 689830 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 689829 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 689799 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 462786 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 462727 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 462726 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 462667 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||||| |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 462666 GATCTTGGCCTTCAC-GTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTT 462608 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 462607 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 462577 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 463014 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 462955 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 462954 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 462895 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 462894 AATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTT 462836 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||| || || ||||| || ||||| Sbjct 462835 TACCGGTCAGGGTCTTGACAAAGATTTGCAT 462805 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 463242 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 463183 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 463182 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 463123 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||||| |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 463122 GATCTTGGCCTTCAC-GTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTT 463064 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 463063 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463033 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 463470 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 463411 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 463410 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 463351 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||||| |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 463350 GATCTTGGCCTTCAC-GTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTT 463292 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || ||||| Sbjct 463291 TGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463261 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 463698 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 463639 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | || | || |||||||||| Sbjct 463638 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 463579 Query 35647 GATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||||| Sbjct 463578 AATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTT 463520 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| |||| || || ||||| || ||||| Sbjct 463519 TACCGGTCAGGGTCTTGACAAAGATTTGCAT 463489 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || ||||| |||||| || || ||||| ||||| Sbjct 690253 CCACCACGGAGACGGAGCACCAAGTGCAACGTCGACTCCTTCTGGATATTGTAGTCGGCG 690194 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| ||||||||||| | ||| Sbjct 690193 AGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGG 690134 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| ||||| ||| | |||| | | |||||| ||| || || Sbjct 690133 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCGAC 690075 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||||||||| || |||| || || ||||| || ||||| Sbjct 690074 CTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACAAAGATTTGCAT 690027 Score = 127 bits (140), Expect = 2e-24 Identities = 160/216 (74%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || ||||| |||||| || |||||||| ||||| | || || | || || Sbjct 689780 CACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTC 689721 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| ||||||||||| | ||| | || |||||||||| Sbjct 689720 GAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTG 689661 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | |||| | | |||||| ||| || ||||| | ||||||||| | Sbjct 689660 GATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCT 689602 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741 | || |||| || || || || || |||| ||||| Sbjct 689601 TGCCAGTCAGGGTCTTGACGAAGATTTGCA-TCTGT 689567 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 ||| ||||| | | | |||||| || | ||| |||||| || ||||| || ||||| Sbjct 463944 TCCGCCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGC 463885 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 | || || | || || |||||||| || || || ||||| ||||||||||| | || Sbjct 463884 GAGCGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 463825 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCA 35687 | || |||||||||| ||||| ||| | |||| | | |||||| ||| || | Sbjct 463824 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC-GTTGTCGATCGTGTCCGACGACTCAA 463766 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| | |||||||||||| || |||| || || || || || ||||| Sbjct 463765 CCTCGAGCGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792771666760