Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq109 241 2e-58 seq91 118 1e-21 seq55 114 2e-20 >seq109 Length=1214152 Score = 241 bits (266), Expect = 2e-58 Identities = 568/848 (67%), Gaps = 11/848 (1%) Strand=Plus/Minus Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 ||||| || |||| || || |||| | ||| || | | | |||||| || || || Sbjct 12456 GCGATCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCG 12397 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 ||||||| ||| || || || ||||| | ||||||||| || |||||| |||| Sbjct 12396 GTGCACAGGTTCGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCG 12337 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 || |||||||| |||||| | || | || ||||| |||| || ||| || || | | Sbjct 12336 GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTAC 12277 Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 || | | | || || || | || ||||| || ||||| | |||||||| | | Sbjct 12276 CAAAGCTTTTGC-GCGGGGATGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCGAA 12218 Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008 ||| | |||||||| || | | || ||| || || |||| | |||||||| Sbjct 12217 CAGGACGCGGAACTCTTCGCCGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAA 12158 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 ||| | ||| | || | |||| || |||| |||||| || || |||||||||||||| Sbjct 12157 GAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGC 12098 Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 |||||||||| ||| ||| ||||||| | || ||||| || | |||| || Sbjct 12097 AAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAA 12038 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 119185 || | || || ||||||||||| || ||||| | ||||| | || ||| Sbjct 12037 CTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 11978 Query 119186 ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245 ||| | |||| || || | ||| ||| ||| | || || ||||| || | ||| || Sbjct 11977 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCC 11918 Query 119246 ATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATG 119303 || || | ||| || || || ||| || ||| | | || | || | ||||||| Sbjct 11917 ATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 11860 Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363 | ||| ||||| || || ||| ||||| |||||||| | |||| || ||||| Sbjct 11859 CTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAG 11800 Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423 || || || |||||||| |||| | | || | |||||| ||| | || || Sbjct 11799 ATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGA 11740 Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTG 119483 || ||||| || |||||||| || || | |||||| |||| | | |||||| | Sbjct 11739 GGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGG 11680 Query 119484 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 | ||||| || ||||||| || | ||||| | ||||| || |||| | ||| ||||| Sbjct 11679 TTGTAGGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACACGCAT 11621 Query 119543 AAACATGT 119550 | ||||| Sbjct 11620 GAGCATGT 11613 >seq91 Length=119584 Score = 118 bits (130), Expect = 1e-21 Identities = 273/409 (67%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 11861 || ||||| || |||| ||| ||| || || || || |||| ||| || | Sbjct 72159 TACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGAGACCCCTCAATCCGAAACG 72100 Query 11862 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 11921 ||||||||||| || || || || || ||| | ||| | || ||| |||| Sbjct 72099 ACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 72040 Query 11922 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGAG 11981 ||||| ||||| || || || | | | |||||| |||||| ||||||||||||||| Sbjct 72039 AAGAACTACCGCGAGTCATACGACATGTACGCGTGCAATGGTATCCTCTTCAACCACGAG 71980 Query 11982 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGATGGTATCAAACAAAT 12040 || || |||||||| | ||||| || | |||||| | ||| | | || | || Sbjct 71979 TCCCCACGTCGTGGTCGCACCTTCGTCACGAGGAAGATTTCGCGA-GCTGTCGCCGAGAT 71921 Query 12041 CGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGG 12100 | ||| | ||| | | | | | || ||| | | ||| || | || ||||| Sbjct 71920 CTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGTGATTGGGG 71861 Query 12101 ACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGA 12160 |||||| |||||||| || | ||||||| | | ||||| || || | ||||| Sbjct 71860 ACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTTCAGCAGGACACCCCCGACGA 71801 Query 12161 ATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 12209 | ||| |||||||||| ||||| ||| |||||| ||||||||| ||| Sbjct 71800 CTTTGTTCTCGCGACGGGTGAGACCCACCCCGTCAAGGAGTTCGTCGAG 71752 >seq55 Length=1512399 Score = 114 bits (126), Expect = 2e-20 Identities = 337/506 (67%), Gaps = 19/506 (4%) Strand=Plus/Minus Query 179681 TACCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCCC--AACTTG 179736 ||||||||| ||||||| ||| || || | | | ||| | | || |||| | |||| Sbjct 470066 TACCCTTGGTCGCCTTGACGATGGGAGTGATGAACTCGAG-CAAGAAGCCCCTCAGCTTG 470008 Query 179737 AGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCA 179796 || | ||| || | |||| | || | ||||| ||| | |||||| ||||| || ||| Sbjct 470007 AGCAACGAAGGGAACCAGTAATCGAGGAAATTGATGATCAAACCCTTGATGTGGGATCCA 469948 Query 179797 TCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGA 179856 |||| |||| ||| | ||| ||||| ||| || || || ||| | || || Sbjct 469947 TCGTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTG 469888 Query 179857 TAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGAT 179916 ||| | || || || || ||||||||||||| ||||| | ||||| ||| || | | Sbjct 469887 TAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--T 469832 Query 179917 GT-GAGTTGCGCC---ACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAA 179972 || ||| ||| | | || || || || || |||| || || | || || Sbjct 469831 GTCGAGCAAGGCCTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAGGGAAA 469772 Query 179973 CACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGA 180032 ||||| |||| || ||||| || || | ||||| | || ||||| | || || || Sbjct 469771 GACACCATAGTTGTCTCGACCGACGACGGCCAGACCGGACACGGCGAGCGCTTTGGCAGA 469712 Query 180033 ATCACCCTCCGTCACGATGAGCGTACACTT--TCCAGATTGTGCCGTCCCTGCCTTGTTC 180090 ||| || || |||| ||||||||| ||||| || | | | ||| || || |||||| Sbjct 469711 ATCTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTTCCAGCGTTGTTC 469654 Query 180091 GCGTCGTCCAACTTGGGAATACCAGTAATTTTGGA-CTTACGAGCGCCATCTGTCTTCTT 180149 || || || | |||| ||||| | ||| || | | | | ||||| ||||| || Sbjct 469653 GCATCCTCGAGCTTGACGATACCCGAAATACGCGATCGTTTGTG-TCCATCCGTCTTTTT 469595 Query 180150 GAGTTCCTTCATCTCCTTGAACTTGG 180175 ||| || || ||||||||||| Sbjct 469594 GAGCATCTGGTCCTGCTTGAACTTGG 469569 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/187 (72%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 129925 GAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTC---TCCGTGCC 129981 |||| |||||||||| || || || ||| |||||| || |||| | ||| |||| Sbjct 263073 GAACTCCTTCTCAATATCAACGGCCTCCTTCACGATC-CG---ATGGACCAATCCTTGCC 263128 Query 129982 A-GGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGACCCTCGT 130040 ||||| ||| |||| |||| | ||||| || || |||||||| |||| Sbjct 263129 CCGGTCTCTTGTTCAAATGACTGAACAAAAGGACGGCGAATTCAGTATGGAGACCTTCGT 263188 Query 130041 CACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACC 130100 | ||||||||||| || || ||||| || || || |||||||| || || ||||| | || Sbjct 263189 CGCGGGAGATGAGCTCGTTGGAGAAACAGAGGCCGGGCATGAGGCCTCGTTTCTTGAGCC 263248 Query 130101 AGAAAAT 130107 |||| || Sbjct 263249 AGAAGAT 263255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434063625320