Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq91 141 1e-28 seq90 123 3e-23 seq55 89.7 6e-13 >seq91 Length=119584 Score = 141 bits (156), Expect = 1e-28 Identities = 271/394 (69%), Gaps = 4/394 (1%) Strand=Plus/Minus Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291 ||| | ||||||||||| || || ||| ||| || || ||| || || || ||| | Sbjct 72165 CGCTTCTACCAAGCCTCGACCTCCGAGCTGTACGGCAAGGTCGTCGAGACCCCTCAATCC 72106 Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351 || ||| ||||||||||| || ||| ||||||||| | ||| | || ||| Sbjct 72105 GAAACGACGCCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGG 72046 Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411 ||||||| || ||||||||||| |||| ||| |||||| || |||||||||||| Sbjct 72045 ATCGTCAAGAACTACCGCGAGTCATACGACATGTACGCGTGCAATGGTATCCTCTTCAAC 71986 Query 7412 CATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGATTAC-CGAGGGTATCA 7469 || || || || | || ||| ||| ||| ||||| | ||||||| | ||| | | || Sbjct 71985 CACGAGTCCCCACGTCGTGGTCGCA-CCTTCGTCACGAGGAAGATTTCGCGA-GCTGTCG 71928 Query 7470 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAG 7529 | ||| ||| || |||| | | | | | || ||||| | || | | | Sbjct 71927 CCGAGATCTCACTCGGTCAACAGGACTGCCTCTACCTCGGCAACATGGAGGCCAAGCGTG 71868 Query 7530 ATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAG 7589 ||||||| || ||| |||||||| || | |||||| | |||||||| || || Sbjct 71867 ATTGGGGACATGCGCGCGACTATGTCGAGGGCATGTGGATGATGCTTCAGCAGGACACCC 71808 Query 7590 CCGACGAATATGTAGTAGCAACGGGTGAGACCCA 7623 ||||||| | ||| | || |||||||||||||| Sbjct 71807 CCGACGACTTTGTTCTCGCGACGGGTGAGACCCA 71774 >seq90 Length=1545510 Score = 123 bits (136), Expect = 3e-23 Identities = 164/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291 ||| | ||||| ||||| || |||||| ||| || || ||| || || || || | Sbjct 1277347 CGCTTCTACCAGGCCTCGACGTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCC 1277288 Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351 ||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||| Sbjct 1277287 GAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGG 1277228 Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411 ||||||| || ||||||||||| |||| |||| |||||| ||| |||||||||||| Sbjct 1277227 ATCGTCAAGAACTACCGCGAGTCGTACGACATGTTCGCGTGCAACGGTATCCTCTTCAAC 1277168 Query 7412 CATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT 7455 || || || || | || ||| ||| ||| ||||| | ||| || Sbjct 1277167 CACGAGTCCCCCCGCCGTGGTCGCA-CCTTCGTCACGAGGAAAAT 1277124 >seq55 Length=1512399 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 94870 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 94929 ||||||||||| ||||| |||||||| || ||||| |||||||||||||| ||||| || Sbjct 263249 TGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAACGAGCTCATCTCCCGC 263190 Query 94930 GACGAGGGACTCCA 94943 ||||| || ||||| Sbjct 263189 GACGAAGGTCTCCA 263176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259728258280