Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq55 100 9e-16
seq63 91.5 4e-13
>seq55
Length=1512399
Score = 100 bits (110), Expect = 9e-16
Identities = 147/207 (71%), Gaps = 1/207 (0%)
Strand=Plus/Plus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| || || || ||||| ||||| || || || || | | || || ||||| || |
Sbjct 1270422 CAAG-TGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCCTCGA 1270480
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || || || ||||| ||||||||||| || || ||||||||||| || || || |
Sbjct 1270481 GCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGA 1270540
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || || || || || || |||| || || | || || || || || | ||||| |
Sbjct 1270541 TCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGC 1270600
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCA 140736
| || || || || || || || ||||
Sbjct 1270601 CCGTAAGGGTCTTGACGAAGATTTGCA 1270627
>seq63
Length=908128
Score = 91.5 bits (100), Expect = 4e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
|||||||| || | | || || | || || || ||||| ||||| || || || ||
Sbjct 127779 ATACCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCC 127720
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
| | || || ||||| || || || || || || ||||| ||||||||||| || ||
Sbjct 127719 GCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGC 127660
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
|| || ||||| || || || || || || || || || || |||| || || | ||
Sbjct 127659 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCG 127600
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGC 140735
|| || || || | ||||| || || || || || || || || |||
Sbjct 127599 ACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 127552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251546113041
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |