Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq109 461 8e-125 seq55 93.3 5e-14 >seq109 Length=1214152 Score = 461 bits (510), Expect = 8e-125 Identities = 797/1148 (69%), Gaps = 15/1148 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 12729 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCC 12673 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | | | ||||||| | ||| || |||||| ||||||| || || || || || Sbjct 12672 TCAGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCATCGGCGAGACCTTGCACTCC 12614 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950 ||| |||| || |||||||| | |||| ||| | ||||||| | ||||| | Sbjct 12613 GATGCCGATGGGGCGGTGGCGGAAGTTGGAATTTTG---CGCCTCGATGACGGGGTAGTA 12557 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||| |||| || |||||| ||||||| || || Sbjct 12556 GTTGACGTCGATGATGCGGTTCAAGTTAAACGCAACGACCTTGACGACCTCGTGCAGCTT 12497 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 ||| || | | | | ||| |||||| |||| | | ||| |||| ||||| Sbjct 12496 TTTGAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAAGCCAAGTTGC 12438 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | || || |||||| || || ||||||||| || ||||||| || ||||| | Sbjct 12437 AGACAGCGCACTCGTCGGGAGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGATT 12378 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| ||||||| |||||| ||||| ||| | ||| ||||||||||||| |||| Sbjct 12377 TGATCGTGCCGAGGTTCTTTTGGTTCGACTTTTTGTTCGCGGCGTCCTTGTAGAGCATGA 12318 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | |||||||| ||||| || ||| | ||| ||| | | | || ||| Sbjct 12317 AGGGGTTGCCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAAAGCTTTTGCGCGGGGA 12258 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 ||||||| ||||||| ||||| || | ||| || ||| | || | Sbjct 12257 TGGTCTTCTTGGCGCGACCCTCCTTTTCGTACTTCTCGAACAGGACGCGGAACTCTTCGC 12198 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 | ||||| ||| | ||||| ||| |||| ||||| | ||| |||| || || | Sbjct 12197 CGTAGACTTCGTGGAGGCCGGGGGCCTCGGCGGGGCAGAAGAGGGGCCACTCGCCGGCGG 12138 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || ||||||||| || || |||||||| || || |||||| || || | Sbjct 12137 CCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGC 12078 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | || || | ||| || ||| || || || || || || | || ||||||||||| Sbjct 12077 GGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCC 12018 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 12017 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 11958 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || ||||||||| | || || |||||||| |||||||| | | | ||||||||| | Sbjct 11957 GCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGAGTAGCCGTTCGTGC 11898 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || ||| | ||| |||| || ||||| | | | ||||| || |||| Sbjct 11897 CGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTTAAACCGATACCACCGGCGG 11838 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||||||||| ||||||||||| || ||||||||||||| Sbjct 11837 TCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCAATCGAGTCGTCCT 11778 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||| |||||| ||| | ||| |||| |||||||| |||||||| | Sbjct 11777 TCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGGGTACCGGCATTGAAGAGCG 11718 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| |||||| | | | ||| || | ||| | || | ||||||| Sbjct 11717 TCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTGTAGGACTGCAAGACGCGCT 11658 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908 || ||||| |||||||||||||| ||||| ||||||| | || ||| || ||| ||| Sbjct 11657 CGATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGCTGCGGACGT-TCG 11599 Query 79909 CCGACATT 79916 |||| || Sbjct 11598 GCGACCTT 11591 Score = 426 bits (472), Expect = 2e-114 Identities = 781/1136 (69%), Gaps = 6/1136 (1%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||||| ||||||||||| || ||||| || ||| ||| Sbjct 11606 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTC 11665 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 || | ||| |||| ||| | || | |||||| ||||| ||||||| || ||| Sbjct 11666 TTGCAGTCCTACAACCTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTC 11725 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || |||||||| |||||||| | ||| || ||| | || | |||||||| ||| Sbjct 11726 AATGCCGGTACCCCTCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGAC 11785 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||| ||||||||||| ||||||||| |||||||| |||||||||| |||| Sbjct 11786 TCGATTGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGT 11845 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 |||||||| | | | || ||||| ||| || | ||| || |||||| Sbjct 11846 GGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGGCTCCTACATCGCCGGCACGAAC 11905 Query 19403 GGAGTAGCCGAC-GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || ||| || |||||||| ||||| ||||||| ||||||||| || | ||||| Sbjct 11906 GGC-TACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAACAACACCGCGCGCTACGT 11964 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | |||| || ||| ||| || || | ||||| |||||||||||||| |||||||| Sbjct 11965 CGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGC 12024 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||||| | || ||||| || || ||| ||| || || | || || | ||| ||| Sbjct 12025 CGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAAGGAAGAAGTCCGCGCTCG 12084 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || |||||| || | ||||| || || || ||||||||| || ||| | || Sbjct 12085 TGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGAGCGTGTCGAGGCCGCCGG 12144 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || |||| ||| | ||||| ||| ||| ||||| | ||| ||||||||||| | Sbjct 12145 CGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCACGAAGTCTACGGCGAAGA 12204 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761 |||| | ||| | || |||| | |||| || ||||||| ||| || Sbjct 12205 GTTCCGCGTCCTGTTCGAGAAGTACGAAAAGGAGGGTCGCGCCAAGAAGACCATCCCCGC 12264 Query 19762 CCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGT 19820 | | | ||| | |||| ||||| | ||||||||||||||||| || | |||| Sbjct 12265 GCAAAAGCTTTGGTA-CGCGATCCTCGAGGCCCAGGTCGAGACCGGCAACCCCTTCATGC 12323 Query 19821 GCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGT 19880 ||||||||||||||||||| ||||| || || |||||| ||||| ||||||| |||| Sbjct 12324 TCTACAAGGACGCCGCGAACAAAAAGTCGAACCAAAAGAACCTCGGCACGATCAAATCGT 12383 Query 19881 CCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATC 19940 | |||||||| || || ||||| ||| || || |||||| || || || || Sbjct 12384 CGAACCTGTGCACCGAGATCATCGAGTACTCGGCTCCCGACGAGTGCGCTGTCTGCAACT 12443 Query 19941 TGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGT 20000 |||| || | |||||| ||| ||||| | | | |||||| || || Sbjct 12444 TGGCTTCGATCGCGTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTCAAAAAGCTGC 12503 Query 20001 ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACC 20060 ||||||| | |||||| || ||| |||| ||| ||||||| |||| |||| Sbjct 12504 ACGAGGTCGTCAAGGTCGTTGCGTTTAACTTGAACCGCATCATCGACGTCAACTACTACC 12563 Query 20061 CGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGG 20120 | | | ||||| || || || | |||||||| || |||| ||||| || || | Sbjct 12564 CCGTCATCGAGGCGCAAAATTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAG 12623 Query 20121 GCCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAG 20179 | || ||||| | |||||| || ||| | | ||||| || |||||||| || Sbjct 12624 GTCTCGCCGATGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCTGAGGCGCGCAAG 12682 Query 20180 CTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||| ||||||||| || | |||||||| || || | |||||||| Sbjct 12683 CTCAACAAGCAGATCTTCGAGACCATCTACCACGCCGCGATCGAGTCTTCGTGCGA 12738 Score = 134 bits (148), Expect = 2e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| ||||||||||||||||| | || |||||| ||||| | || Sbjct 13545 GGCGCGCGTGCGCAAGTAGTACATGCCCGTCTTCAATCCTCGCTTCCAGCCGTAAAAATG 13486 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| ||||| || || ||||||||| || || ||||| Sbjct 13485 CATCGACGTGAGCTGCGCCATCGTCGGGCTCGACAAATGGATGTTGAGTGATTGCGACTG 13426 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||||||| | ||||| |||||||| | || ||||||| | |||||||| | ||||| Sbjct 13425 GTCGATGAATGCACCCCGGTCGGCGGACAGATCGATGATGGTCTTTTGCGAGAGTTCCCA 13366 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 13365 GACGGTCTTGTAGATGGCCTTGAGATC 13339 Score = 125 bits (138), Expect = 8e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| |||||| || | || |||| ||||||||| || | Sbjct 13342 CTCAAGGCCATCTACAAGACCGTCTGGGAACTCTCGCAAAAGACCATCATCGATCTGTCC 13401 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || || | |||||||||||| || || ||||| || || || ||| Sbjct 13402 GCCGACCGGGGTGCATTCATCGACCAGTCGCAATCACTCAACATCCATTTGTCGAGCCCG 13461 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| |||| | || |||||| | ||||||||| | || | ||||||||| Sbjct 13462 ACGATGGCGCAGCTCACGTCGATGCATTTTTACGGCTGGAAGCGAGGATTGAAGACGGGC 13521 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 13522 ATGTACTACTTGCGCACGCGCGCC 13545 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||| ||| | ||||| || ||| ||| Sbjct 62630 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGCTTGATGCCCGGATTGACCTTC 62571 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| ||||| || |||||||||||||| Sbjct 62570 TCCAACGAGCTCATTTCGCGTGACGAGGGCCTCCA 62536 >seq55 Length=1512399 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || ||||||||||| || || ||||||||||| ||||| |||||||||||||||| || Sbjct 263255 ATCTTCTGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAACGAGCTCATC 263196 Query 60099 TCCCGGGACGAGGGCCTCCAT 60119 ||||| ||||| || |||||| Sbjct 263195 TCCCGCGACGAAGGTCTCCAT 263175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523792085680