Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq90 147 2e-30 >seq90 Length=1545510 Score = 147 bits (162), Expect = 2e-30 Identities = 238/340 (70%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177 ||||||||| || | || ||||| | |||||| ||||| | | ||||| | || Sbjct 1223248 GGGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTGGGGTTCTCCTTGATGCTCTTGAC 1223307 Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACT 30236 | | || |||||| |||||| ||| || || || | |||| | |||| Sbjct 1223308 AACCTGCATCAACTGATCGACCCCCTCGCCCTGATAATCATCCTTGGCCGTCC-TATACT 1223366 Query 30237 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30296 |||| || |||||||||||||| ||||| || ||||| |||| || ||||||||||| | Sbjct 1223367 CTGCCCCAAAATGCCTCCACTGAAACCCATAAACCGGCCCCAAATCCCCCTCTTCCCTAT 1223426 Query 30297 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356 || | || || ||| ||||| || || | || || || | ||||| ||||| |||| Sbjct 1223427 GCCCCAACCCAACCTTCTCCAAGAACTCCTTCGAGCCATTCCCATCCCAAATCTTGACCC 1223486 Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 |||| || || | | ||| || | || || |||| ||||||||||| || ||||| | Sbjct 1223487 CCTTGTCGGACAACAATTTCGAATCAGTCGATCCTCGAACGAACCACAGGAGTTCCTCAA 1223546 Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 || | | | ||||||| |||||||||| | ||||| Sbjct 1223547 TGATGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGG 1223586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309672069524