Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq63 154 4e-32 seq55 147 5e-30 seq101 125 2e-23 seq61 87.8 4e-12 >seq63 Length=908128 Score = 154 bits (170), Expect = 4e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | |||||| || || || ||||||| ||||| || || | ||| | ||||| Sbjct 127761 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 127702 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || ||||| ||||| ||||| || |||||||||||| Sbjct 127701 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 127642 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| ||||| || | || || || | ||||||||| Sbjct 127641 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 127582 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGC 225711 |||||||| | ||| || | ||| | |||| Sbjct 127581 TTGCCCGTAAGAGTCTTGACGAAGATTTGC 127552 >seq55 Length=1512399 Score = 147 bits (162), Expect = 5e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||| || || || ||||||| ||||| || || | ||| | ||||| Sbjct 1270417 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTACGGCCATCC 1270476 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || ||||| ||||| || ||||| |||||||||||| Sbjct 1270477 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 1270536 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| ||||| |||| || || || | ||||| ||| Sbjct 1270537 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 1270596 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712 |||||||| | || || | ||| | ||||| Sbjct 1270597 TTGCCCGTAAGGGTCTTGACGAAGATTTGCA 1270627 >seq101 Length=1647458 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| ||||| ||||| | || | ||||| || |||||||| ||| Sbjct 462773 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 462714 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||| || ||||| || || || || |||||||| |||||||| |||| Sbjct 462713 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 462654 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| || | || || || | ||||||||| ||||| |||| || Sbjct 462653 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 462594 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 462593 TTGACGAAGATTTGCAT 462577 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| ||||| ||||| | || | ||||| || |||||||| ||| Sbjct 463229 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 463170 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||| || ||||| || || || || |||||||| |||||||| |||| Sbjct 463169 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 463110 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| || | || || || | ||||||||| ||||| |||| || Sbjct 463109 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 463050 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 463049 TTGACGAAGATTTGCAT 463033 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| ||||| ||||| | || | ||||| || |||||||| ||| Sbjct 463457 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 463398 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||| || ||||| || || || || |||||||| |||||||| |||| Sbjct 463397 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 463338 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| || | || || || | ||||||||| ||||| |||| || Sbjct 463337 ACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 463278 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 463277 TTGACGAAGATTTGCAT 463261 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| ||||| ||||| | || | ||||| || |||||||| ||| Sbjct 689767 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 689708 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||| || ||||| || || || || |||||||| |||||||| ||| Sbjct 689707 GCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 689648 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| || | || || || | ||||||||||||||| |||| || Sbjct 689647 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTC 689588 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 689587 TTGACGAAGATTTGCAT 689571 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| ||||| ||||| | || | ||||| || |||||||| ||| Sbjct 689995 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 689936 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||| || ||||| || ||||| || |||||||| |||||||| ||| Sbjct 689935 GCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 689876 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| || | || || || | ||||||||| ||||| |||| || Sbjct 689875 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 689816 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 689815 TTGACGAAGATTTGCAT 689799 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||| || || || || |||| || || ||||| | || | ||||| Sbjct 463928 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCATCC 463869 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | ||| || ||||| || || || || |||||||| Sbjct 463868 TCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 463809 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| || | || || || | ||||||||| Sbjct 463808 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCAACCTCGAGCGTGATCGTT 463749 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | |||||| Sbjct 463748 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 463717 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| |||||| ||||| | || | ||||| || |||||||| ||| Sbjct 690223 GTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 690164 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||| || ||||| || || || || |||||||| || ||||| ||| Sbjct 690163 GCGAAGATCAATCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 690104 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| || | || || || | ||||||||| ||||| |||| || Sbjct 690103 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTGCCGGTCAGGGTC 690044 Query 225697 TTTATGAACACTTGCAT 225713 || | || | |||||| Sbjct 690043 TTGACAAAGATTTGCAT 690027 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| ||||| ||||| | || | ||||| || |||||||| ||| Sbjct 463001 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 462942 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||| || ||||| || || || || |||||||| || ||||| ||| Sbjct 462941 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 462882 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| || | || || || | ||||||||| || || |||| || Sbjct 462881 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTC 462822 Query 225697 TTTATGAACACTTGCAT 225713 || | || | |||||| Sbjct 462821 TTGACAAAGATTTGCAT 462805 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || || |||| ||||| ||||| | || | ||||| || |||||||| ||| Sbjct 463685 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCA 463626 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | ||| || ||||| || || || || |||||||| || ||||| ||| Sbjct 463625 GCGAAGATCAATCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 463566 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| ||||| || | || || || | ||||||||| || || |||| || Sbjct 463565 ACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTTTTACCGGTCAGGGTC 463506 Query 225697 TTTATGAACACTTGCAT 225713 || | || | |||||| Sbjct 463505 TTGACAAAGATTTGCAT 463489 >seq61 Length=26871 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 ||||| ||||||||||| | | || || || |||||||| || |||||||| ||| Sbjct 534 AATGGCAATTTATGCATCGCCATTCCTGGGTGTCGCATATTAATAATAGTAGTAATGAAG 475 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 || ||||| |||| | |||| ||||| || | ||| | ||| || || |||| ||| Sbjct 474 TTCATAGCACCTAACATAGAACTAATACCAGCTAAATGAAGACTGAAAATAGCTAGATCT 415 Query 371485 ACGGAACCGCCGGAGTGA 371502 || ||||| || |||||| Sbjct 414 ACAGAACCACCTGAGTGA 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528953942018