Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12- 23] 147 sequences; 25,410,563 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq90 149 5e-31 >seq90 Length=1545510 Score = 149 bits (164), Expect = 5e-31 Identities = 240/342 (70%), Gaps = 6/342 (2%) Strand=Plus/Plus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||||||||| || | || ||||| | |||||| ||||| | | ||||| | || Sbjct 1223248 GGGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTGGGGTTCTCCTTGATGCTCTTGAC 1223307 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG---TA 27500 | | || |||||| |||||| ||| || || | ||| || |||| || Sbjct 1223308 AACCTGCATCAACTGATCGACCCCCTCGCCCTGATAATC-ATCCT--TGGCCGTCCTATA 1223364 Query 27501 CTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 27560 |||||| || ||||||||||| || ||||| || ||||| |||| || ||||||||||| Sbjct 1223365 CTCTGCCCCAAAATGCCTCCACTGAAACCCATAAACCGGCCCCAAATCCCCCTCTTCCCT 1223424 Query 27561 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 27620 ||| | || || ||| ||||| || || | || || || | ||||| ||||| || Sbjct 1223425 ATGCCCCAACCCAACCTTCTCCAAGAACTCCTTCGAGCCATTCCCATCCCAAATCTTGAC 1223484 Query 27621 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680 |||||| ||||| | | ||| || | || || |||| ||||||||||| || ||||| Sbjct 1223485 CCCCTTGTCGGACAACAATTTCGAATCAGTCGATCCTCGAACGAACCACAGGAGTTCCTC 1223544 Query 27681 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | || | | | ||||||| |||||||||| | ||||| Sbjct 1223545 AATGATGCCTCGCGTAAAGACCTTCTTGGTCGTCAAAAGGGG 1223586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506538004757